Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_031224.1 Length=59443 Score E Sequences producing significant alignments: (Bits) Value seq655988 122 3e-23 seq307809 82.4 3e-11 >seq655988 Length=4118 Score = 122 bits (134), Expect = 3e-23 Identities = 353/542 (65%), Gaps = 31/542 (6%) Strand=Plus/Minus Query 51809 GGGCTTCCCGCTCATCACCACCAAGAAGGTGCATTTCCCATCAGTGGTCGGGGAGTTGCT 51868 |||||| ||||| ||||||| ||||| ||||| || ||| | ||| || |||| Sbjct 3085 GGGCTTTCCGCTGGTCACCACGAAGAAAGTGCACCTCAAATCCATCATCGAAGAACTGCT 3026 Query 51869 GTGGTTGCTTTCGGGCTCTACGAACGTCAACGATCTCCATAAGTACGGCGTCAGCATTTG 51928 |||||| || | ||||| ||| | | || || || ||| ||||||||||| Sbjct 3025 GTGGTTCCTCGCCGGCTCGGGCAACAACCGCTGGCTGCAGCAGCGCGGTGTCAGCATTTG 2966 Query 51929 GGACGAATGGGCGGATGAAAATGGTAACCTGGGTCCTGTGTATGGTAAGCAGTGGCGTAG 51988 ||||||||||||| | | | || | ||||| || ||||| || ||| ||||| || Sbjct 2965 GGACGAATGGGCGCGCGCAGACGGCGATCTGGGCCCGGTGTACGGCGTGCAATGGCGCAG 2906 Query 51989 TTGG----GATGCTGGTGGCGGCAAGGTCATCGATCAGATCCATGAAGTCGTCAAATCAA 52044 |||| || | | |||||| | ||||| |||||| | ||| || | Sbjct 2905 TTGGCCCCGA-CCCGATGGCGG---GCATATCGACCAGATCGGTTCGGTCATCGCCACGC 2850 Query 52045 TTAAGAACGATCCTGATAGTCGACGGCACATTGTCTCTGCTTGGAATGTGGGTGATTTGG 52104 | |||| | | || || || || ||| ||| || ||||| |||| || | | Sbjct 2849 TCAAGACCAACCCCGACTCGCGCCGCATCATCGTCAGCGCCTGGAACGTGGCCGAACTCG 2790 Query 52105 ATGATATGGCGTTGGCTCCCTGCCATACACTATTCCAATTCTATGT--------AGCTGA 52156 | | ||||| ||| ||||| || | ||| || || ||||| || || || Sbjct 2789 ACAAAATGGCCTTGCAGCCCTGTCACATACTCTTTCAGTTCTACGTGGCCCCGGCGCAGA 2730 Query 52157 -------------AGGTAAGCTTTCGTGCCATTTGTATCAGCGGTCTGCCGACATGTTCT 52203 || | ||| ||||| | || ||||| |||||||| ||| Sbjct 2729 CGCCGGGCGGGCGCGGCACGCTCAGTTGCCAGCTCTACCAGCGCAGCGCCGACATCTTCC 2670 Query 52204 TGGGCGTTCCGTTTAACATTGCCAGCTATTCCTTGCTGACGCATCTGATTGCTCGAGCAG 52263 ||||| | || || ||||| |||||||| | ||||||| ||| || | || | |||| Sbjct 2669 TGGGCCTGCCCTTCAACATCGCCAGCTACGCGCTGCTGACCCATATGGTGGC-CCAGCAA 2611 Query 52264 TTGGCCTT-GATGTTGGTGAATTCATTTGGACTGGTGGCGACGTCCATATCTACAACAAC 52322 | | || || || ||||| ||||| ||||| ||||||||| |||||||||| ||||| Sbjct 2610 TGCGAGTTGGACGTGGGTGAGTTCATCTGGACCGGTGGCGACTGCCATATCTACGACAAC 2551 Query 52323 CA 52324 || Sbjct 2550 CA 2549 >seq307809 Length=2175 Score = 82.4 bits (90), Expect = 3e-11 Identities = 109/149 (73%), Gaps = 2/149 (1%) Strand=Plus/Minus Query 52110 ATGGCGTTGGCTCCCTGCCATACACTATTCCAATTCTATGTAGCTGAAGGTAAGCTTTCG 52169 |||||| || | || ||||| | || | || |||||||| || | || | || ||| Sbjct 883 ATGGCGCTGCCACCATGCCACGCTCTGGTGCAGTTCTATGTTGCCAACGGAGAACTCTCG 824 Query 52170 TGCCATTTGTATCAGCGGTCTGCCGACAT-GTTCTTGGGCGTTCCGTTTAACATTGCCAG 52228 |||| ||||| ||||| || || || | | ||| || ||||| |||||||||||||| Sbjct 823 TGCCTGTTGTACCAGCGCTCGGCAGATGTTGGTCTCGGT-GTTCCATTTAACATTGCCAG 765 Query 52229 CTATTCCTTGCTGACGCATCTGATTGCTC 52257 ||| | ||| |||| || ||||||||| Sbjct 764 CTACGCTTTGTTGACATATATGATTGCTC 736 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 186349800345470