Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_031235.1 Length=194437 Score E Sequences producing significant alignments: (Bits) Value seq415711 104 3e-17 seq1657888 91.5 2e-13 seq1573962 89.7 6e-13 seq1428625 86.0 8e-12 >seq415711 Length=2026 Score = 104 bits (114), Expect = 3e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 19649 GGGGAATTAGCTCAGTTGGTAGAGCACCTGCTTTGCAAGCAGGCTGTCAGGAGTTCGAGT 19708 |||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||||| Sbjct 1173 GGGGCCTTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAGGAGTTCGAGT 1114 Query 19709 CTCCTATTCTCC 19720 |||||| |||| Sbjct 1113 CTCCTAGGCTCC 1102 >seq1657888 Length=995 Score = 91.5 bits (100), Expect = 2e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 167482 TCGGGGCGTAGCTCAGTTTGGTAGAGCACTCGCTTTGGGAGCGAGTGGCCGTAGGTTCAA 167541 |||||||||||||||| |||||||||| | ||||||||||||| | | || |||||| | Sbjct 778 TCGGGGCGTAGCTCAGCTTGGTAGAGCGCCCGCTTTGGGAGCGGGAAGTCGCAGGTTCGA 837 Query 167542 ATCCTATCGCCCCGA 167556 ||||| ||||||||| Sbjct 838 ATCCTGTCGCCCCGA 852 >seq1573962 Length=251 Score = 89.7 bits (98), Expect = 6e-13 Identities = 60/67 (90%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 19748 TTCCTCTATAGCTCAGTCGGTAGAGCGAGTGACTGTTAATCACTATGTCCCTGGTTCGAG 19807 |||||| |||||||||||||||||||| ||||||||||| || |||||||||||||| Sbjct 67 TTCCTCGATAGCTCAGTCGGTAGAGCGCCGGACTGTTAATCCGTAGGTCCCTGGTTCGAG 8 Query 19808 CCCAGGT 19814 ||||||| Sbjct 7 CCCAGGT 1 >seq1428625 Length=160 Score = 86.0 bits (94), Expect = 8e-12 Identities = 61/70 (87%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 165786 GTAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCACAGGTTCGAGTCCTGT 165845 |||||||||| ||||||||||| ||||||||||| |||||||||||||||| |||||| Sbjct 4 GTAGCTCAGTCGGATAGAGCAATCGCCTTCTAAGCGATCGGTCACAGGTTCGAATCCTGT 63 Query 165846 CTGACCCGCC 165855 | | | |||| Sbjct 64 CGGGCGCGCC 73 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 609166117191240