Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_031242.1 Length=174307 Score E Sequences producing significant alignments: (Bits) Value seq415711 105 7e-18 seq1428625 84.2 2e-11 >seq415711 Length=2026 Score = 105 bits (116), Expect = 7e-18 Identities = 67/73 (92%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 18249 GGGGGATTAGCTCAGTTGGTAGAGCACCTGCTTTGCAAGCAGGCTGTCAGGAGTTCGAGT 18308 |||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||||| Sbjct 1173 GGGGCCTTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAGGAGTTCGAGT 1114 Query 18309 CTCCTATTCTCCA 18321 |||||| ||||| Sbjct 1113 CTCCTAGGCTCCA 1101 >seq1428625 Length=160 Score = 84.2 bits (92), Expect = 2e-11 Identities = 55/61 (90%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 159829 GTAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCACAGGTTCGAGTCCTGT 159888 |||||||||| ||||||||||| ||||||||||| |||||||||||||||| |||||| Sbjct 4 GTAGCTCAGTCGGATAGAGCAATCGCCTTCTAAGCGATCGGTCACAGGTTCGAATCCTGT 63 Query 159889 C 159889 | Sbjct 64 C 64 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546086368331640