Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_031252.1 Length=51290 Score E Sequences producing significant alignments: (Bits) Value seq657484 111 5e-20 >seq657484 Length=4216 Score = 111 bits (122), Expect = 5e-20 Identities = 229/331 (69%), Gaps = 10/331 (3%) Strand=Plus/Plus Query 30895 ATAATGGCCGGTGAAACAACGATCACAGTGATCGGAAACCTGACGAACGATCCAGAGCTA 30954 || ||||| || ||||| || || || || | || ||||| ||| |||||||| || Sbjct 2899 ATCATGGCTGGCGAAACGACCATTACCGTCGTGGGTAACCTCACGGCTGATCCAGAACTG 2958 Query 30955 CGGTTCACGCCGTCTGGCAGCGCTGTCGCGAACTTCACGATCGCGAGCACACCGCGAACG 31014 || | ||| | | || || ||||| ||||||||||| || || || || | Sbjct 2959 CGCTACACCCAGAACGGGTTGGCGGTCGCAAACTTCACGATTGCCTCTACCCCCCGCAAC 3018 Query 31015 TTCGATCGACAGTCAAACGAGTGGAAAGACGGCGAGACGCTCTTCCTGCGCGCTGCTGTC 31074 ||||| || ||| | | |||||||| ||||||||| | || ||||| || || | | Sbjct 3019 TTCGACCGTCAGACCAGTGAGTGGAAGGACGGCGAGCCCCTGTTCCTTCGAGCGAGTTGC 3078 Query 31075 TGGCGCGAGACTGCAGAGAATGTCGCAGAG-TCCCTG--CAGAAGGGCATGGAGGTCATC 31131 ||||| ||| ||| || | || || ||| || || | | || || | ||||| Sbjct 3079 TGGCGTGAGTTTGCCGATCACGTTGC-GAGCTCGTTGACCCGCGGGTCACG--CGTCAT- 3134 Query 31132 TGCG-TCGGGCGTCTGAAGTC-GCGCAGCTACGAGACGAAAGAGGGCGAGAAGCGCACTG 31189 |||| ||| || ||| ||| ||| |||||||||||||||||||| |||||||| Sbjct 3135 TGCGACCGGACGGCTG-CGTCAGCGTCAATACGAGACGAAAGAGGGCGAAAAGCGCACCT 3193 Query 31190 TCATCGAGCTCGAAGTCGACAGCATCGGCCC 31220 ||||| ||||| ||||| |||||||| Sbjct 3194 CGATCGAACTCGAGATCGACGAAATCGGCCC 3224 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160774345043448