Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_031935.1 Length=186386 Score E Sequences producing significant alignments: (Bits) Value seq415711 96.9 4e-15 seq1657888 89.7 6e-13 seq1638491 89.7 6e-13 >seq415711 Length=2026 Score = 96.9 bits (106), Expect = 4e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 17859 GGGGAATTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAGCGGTTCGAGT 17918 |||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1173 GGGGCCTTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAGGAGTTCGAGT 1114 Query 17919 CCGCTATTCTCCA 17931 | ||| ||||| Sbjct 1113 CTCCTAGGCTCCA 1101 >seq1657888 Length=995 Score = 89.7 bits (98), Expect = 6e-13 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 158204 TTCGGGGTGTAGCTCAGTTTGGTAGAGCGCCGTCTTTGGGAGGCGGATGCCGTAGGTTCG 158263 ||||||| ||||||||| ||||||||||||| ||||||||| ||| | || ||||||| Sbjct 777 TTCGGGGCGTAGCTCAGCTTGGTAGAGCGCCCGCTTTGGGAGCGGGAAGTCGCAGGTTCG 836 Query 158264 AATCCTATCACCCCGAC 158280 |||||| || ||||||| Sbjct 837 AATCCTGTCGCCCCGAC 853 >seq1638491 Length=449 Score = 89.7 bits (98), Expect = 6e-13 Identities = 65/74 (88%), Gaps = 1/74 (1%) Strand=Plus/Minus Query 17859 GGGGAATTAGCTCAGTTGG-TAGAGCGCCTGCTTTGCAAGCAGGATGTCAGCGGTTCGAG 17917 |||| |||||||||| ||| |||||||||||| ||||| |||||| |||| |||||||| Sbjct 262 GGGGGATTAGCTCAGCTGGCTAGAGCGCCTGCCTTGCACGCAGGAGGTCAACGGTTCGAC 203 Query 17918 TCCGCTATTCTCCA 17931 |||| ||||||||| Sbjct 202 TCCGTTATTCTCCA 189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583937351266320