Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq625167 89.7 1e-12 seq47075 84.2 5e-11 >seq625167 Length=369 Score = 89.7 bits (98), Expect = 1e-12 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| ||||| || || || || |||||||||||||| | ||| ||| ||| Sbjct 159 CAGATTTTTGTGAAGACACTGACTGGTAAAACGATCACCCTTGGGGTTGAACCAAGTGAC 218 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| |||||||| || |||||| | |||| |||||||| ||||| |||||||| Sbjct 219 ACCATTGAGAACGTGAAGGCAAAGATCCTATACAAGGAAGGAATTCCTCCAGACCAGCAG 278 Query 178044 CG 178045 || Sbjct 279 CG 280 >seq47075 Length=4692 Score = 84.2 bits (92), Expect = 5e-11 Identities = 74/90 (82%), Gaps = 2/90 (2%) Strand=Plus/Plus Query 178022 AGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAG 178081 ||| |||||||| || |||||||| || ||||| || ||||| ||||||||||||||||| Sbjct 2890 AGGCATCCCTCCTGATCAGCAACGTCTGATCTTTGCGGGAAAGCAGCTCGAAGATGGAAG 2949 Query 178082 GACTCTTG-CCGATTATAACGTCCAAAAAG 178110 || |||| ||||||||| | || |||| Sbjct 2950 AAC-CTTGAGTGATTATAACATTCAGAAAG 2978 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178136637027238