Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enteromyxum_20leei_20[genbank_20GCA_5F001455295.1_202015-12-02] 69,045 sequences; 67,975,573 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq68710 89.7 5e-13 seq67756 89.7 5e-13 seq25167 86.0 6e-12 >seq68710 Length=718 Score = 89.7 bits (98), Expect = 5e-13 Identities = 85/109 (78%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 16986 CCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCT 17045 |||||||||||||||| || ||||| || || |||| ||||||||| |||| |||| Sbjct 326 CCTCGTCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCTCTTCT 385 Query 17046 TTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGAC 17094 | | ||| || || || ||||| || ||||| ||||| || ||||| || Sbjct 386 TCAGCCAGAAGATGGCAGCGAAGGAACCAGAGAAGAAGATTCCCTCCAC 434 >seq67756 Length=723 Score = 89.7 bits (98), Expect = 5e-13 Identities = 85/109 (78%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 16986 CCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCT 17045 |||||||||||||||| || ||||| || || |||| ||||||||| |||| |||| Sbjct 393 CCTCGTCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCTCTTCT 334 Query 17046 TTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGAC 17094 | | ||| || || || ||||| || ||||| ||||| || ||||| || Sbjct 333 TCAGCCAGAAGATGGCAGCGAAGGAACCAGAGAAGAAGATTCCCTCCAC 285 >seq25167 Length=1585 Score = 86.0 bits (94), Expect = 6e-12 Identities = 134/189 (71%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 ||||| || ||||| | |||||||||||||| ||||| || || || || || || || Sbjct 1245 ATATAAGTGTCGATCAACAGGCTGTACATTTCTGAGTGAATATTTTCAATTGCAATTTGC 1186 Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGT-AGAATCGTTCCGCTAG 17352 | ||| |||||||||| | |||| | ||| |||| ||| | || | ||| | | Sbjct 1185 AGTCCATAAAAGCATCTGACTTCAGGCCATTGTACTT-CACTTGCAAAACATTCAACCAA 1127 Query 17353 ATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATA 17412 ||||| || || || || || || || || || |||||||||| ||| | |||| Sbjct 1126 GTTTTCATTTACAATACCATCACTGGCAGCAAAGAACGCCAATACATGTGATACAAAATG 1067 Query 17413 TTTTTCGTC 17421 |||||| || Sbjct 1066 TTTTTCTTC 1058 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517098925800600