Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enteromyxum_20leei_20[genbank_20GCA_5F001455295.1_202015-12-02] 69,045 sequences; 67,975,573 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq22640 176 5e-39 seq25167 147 3e-30 seq59245 120 4e-22 >seq22640 Length=3951 Score = 176 bits (194), Expect = 5e-39 Identities = 729/1140 (64%), Gaps = 39/1140 (3%) Strand=Plus/Minus Query 53153 TGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGAC 53212 |||||||| ||||| || || | ||| | |||||||| | ||||| ||||| | ||| Sbjct 1947 TGAAATTCCCCAGATAAAACACGTCGATTATAAATATTTGTTGTATAAGGTTCAATAGAT 1888 Query 53213 TCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTA 53272 || || ||||||| ||||||| ||||| || || ||||| ||||| | || | |||| Sbjct 1887 TCGTTGTTTCCCATTATTTGAGACGTTGACGCCGTAGGCATTGGTGCAATTAAAAGACTA 1828 Query 53273 TTTCTAAGACCGTATGTTC--TGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCG 53330 ||||||| ||| |||||| |||||||| |||| | | || ||||| ||| | ||| | Sbjct 1827 TTTCTAACACC--ATGTTCCTTGATTTTAGCTTTCAATGATTTCCAATCCCATAAATCAG 1770 Query 53331 ACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTA---CTGGCGTACGATCCTA 53387 || || ||||| ||||| | | ||| || || || Sbjct 1769 TAGGAGTAATATTCCACATGTCATATTGTAAGATACCTTGAGATATGG-GT--GAATCTT 1713 Query 53388 CATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGT 53447 || || |||| || | | | ||| |||||| | ||| | ||| | | Sbjct 1712 TGTAAGTGGAGTATACGCCATGTTCTTTTGCTTCTTCACATGAAGACTCAAGTGCGGCAT 1653 Query 53448 AATAAATGGTTTCGAAGATCTTCTTATT-TAGATCTTGTGCTTCCAGGCTATCAAATGGA 53506 ||| || ||||| || || | |||| | || || ||||| |||||| ||||| Sbjct 1652 GATATATTGTTTCAAATATTTCAATATTCAACTTCCTG-GCTTCTGCGCTATCGAATGG- 1595 Query 53507 TAATTTAAG-AGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATG 53565 | | |||| || || || || || | ||||| || ||||| || | ||||||||| Sbjct 1594 CATTCTAAGTTTGATGAATGCATCAGCAAGACCTTGTACGCCAATTCCTACAGGTCTATG 1535 Query 53566 TCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATT 53625 | | |||| || ||| |||||| || ||||| |||| | ||| || || ||||| Sbjct 1534 ACGCATATTTGAATTTTTTGCTTCTATAACGGGATAGAAATTCAAATCAATTATCTTATT 1475 Query 53626 GAGGTTTCTGACAATTACTT---TGACCACATCCTTCAGTTTGA---GAAA--------- 53670 | ||| | || ||||||| ||||| ||| | ||||| |||| Sbjct 1474 CAAGTTCTTAACTATTACTTTTGTGACCTCATGAAGCTTTTTGAAATGAAATGTTTTAGT 1415 Query 53671 ATCAAATTGTCCATCTATT------ACAAACATGTTCAATGCAATAGATGCCAGATTACA 53724 || | || | || | || |||||| | || ||||| || || || || Sbjct 1414 ATTATCTTTTTCAGATTTTGAATAAACAAACTTCGGCAGACATATAGAAGCTAGGTTGCA 1355 Query 53725 AACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTT 53784 || || |||| ||| | || | | || ||||| || | ||| || |||| Sbjct 1354 CACAGCGGTTTCATCTTTATCAGAGTACTCAACAATTTCAGTACACAAATTGCTTGACTT 1295 Query 53785 GATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAA 53844 ||| ||| | ||||| ||||||| || || || ||||| || |||| ||| | Sbjct 1294 GATCACTCCAACATTTTTTTGATTAGATTTGCGATTGCATGCATCTTTGTAAACCATGTA 1235 Query 53845 TGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTAT 53904 |||| |||||||||| || || | ||| | ||| | ||| | | |||| || || Sbjct 1234 TGGCATACCAGTTTCTATTTGAGCTTCCAAAATAGAAAACCACAAAGCCTGAGCGTTAAT 1175 Query 53905 TATAGATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGT-TCAAACTCGTCTC 53963 | || || | ||||| ||| || ||| || || | | | ||| || || | Sbjct 1174 TTGCTTCTTATAACGTTTTTCAGATTCATACTTTGTGTA-AAGCTTATTAAATTCTTCAC 1116 Query 53964 CCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCAT 54023 | | || ||||| || |||||| ||||||||||| ||||||| | | | || Sbjct 1115 CGTAGCAATCAGATAATCCTGGTGATTCATGTGGACACATCAAAGACCACTTTTCATTAT 1056 Query 54024 CCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTC 54083 || || || | |||||| | ||| || ||||| | || ||| | ||||| | | Sbjct 1055 TTTTTACACGCTCCATAAATAAATCCGGTATCCATAATGCATAAAACAAGTCTCTAGCGC 996 Query 54084 TATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCC 54143 ||| ||| | || || || ||| | | || | || | | ||||| || |||| Sbjct 995 GTACTTCTTCGCTGCCAGTGTTTTTTCTCAATTCTAAAAATTCTTTTATATCTGAGTGCC 936 Query 54144 ACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATC 54203 ||||||| | ||| | | | ||||| || || ||||| || ||||||| ||||| Sbjct 935 ACGGTTCGAGGTAAACAGCAAATGAACCAGGGCGCTTATTTCCACCTTGATCTACGTATC 876 Query 54204 TAGCGGTGTTATTATAAACTCTCAACATTGGAA-TAATACCATTGGATGCACCATTGGTC 54262 | | ||||| || || |||||||||| |||| |||| ||||| ||| ||||| ||| Sbjct 875 TGGACGTGTTGTTGTACACTCTCAACAACGGAACTAAT-CCATTTGATATTCCATTAGTC 817 Score = 120 bits (132), Expect = 4e-22 Identities = 207/299 (69%), Gaps = 4/299 (1%) Strand=Plus/Minus Query 54325 TTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCAT 54384 ||| || || | || |||| || | |||||| | ||||| || || ||||| || | Sbjct 535 TTTCGAAATGAGTGAGCATTCCTTCAGGGTATCAAAAATGCCTTCAATGCTATCGTCTTT 476 Query 54385 CATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGT 54444 ||| | ||||| || || |||||||| | | ||| || | || || || || Sbjct 475 CATAGCGACAAGAAAGCAACTGGACATTTGTGGTCTGGGAGTACCGGAGTTGAACAAAGT 416 Query 54445 AGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTC 54504 ||| | ||||| ||||||||| ||||| | || |||||| || || ||||| | || Sbjct 415 AGGTGTGGCGTGAGTAAACCATCCATCAGACATTAAATTGTAAGTTTCAATAGCGGCATC 356 Query 54505 TATATCCCATTGATGA--ATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCA 54562 ||||| ||| ||| ||||| || || || | ||| | |||||| || ||||||||| Sbjct 355 AATATC--ATTCATGTGTATTCCAACAGCCACTCTCATCAGCATGTGTTGTGGTCTTTCA 298 Query 54563 ACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATA 54621 || | | | ||| ||| ||| ||| || || |||| | ||||| || |||||||| Sbjct 297 ACAACAATATCGTTGATTCTCATCAAATACGACCTTTCAAGTGTTTTGAAGCCAAAATA 239 Score = 96.9 bits (106), Expect = 4e-15 Identities = 167/241 (69%), Gaps = 4/241 (2%) Strand=Plus/Minus Query 52786 TTTTATTTTATCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAG 52845 ||| |||||||| | || | || |||||||| ||| | ||||| | | | || Sbjct 2349 TTTAATTTTATCGGTATCAACAGTAAATTGAATAGGATTTGCACCGGGTCTTGATCTAAG 2290 Query 52846 ATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTT 52905 |||||||||||| ||||| || || | ||||||||||||||||||| || || ||||| Sbjct 2289 ATAGTACATTCCAGTTTTGAGGCCCTTATTCCATCCGTAAAAATGCATGCTAGTAAGTTT 2230 Query 52906 --GGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCT 52963 || | | || || || ||| | || | ||||||||||||||| || || | Sbjct 2229 TCCGACTGA--AGGTTCAGCCATAAAAACGTTGAAAGATTGACTTTGATCAATAAAAGGA 2172 Query 52964 CCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAA 53023 || | || |||||||| | || | || || || || |||||| ||||||||| Sbjct 2171 CCACGATCAGCAGCCATATCAATAAGTGTTTTCATTGAAAGTTCCCATGAGGTTTTATAA 2112 Query 53024 A 53024 | Sbjct 2111 A 2111 >seq25167 Length=1585 Score = 147 bits (162), Expect = 3e-30 Identities = 209/287 (73%), Gaps = 8/287 (3%) Strand=Plus/Minus Query 24308 ATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCAT-TGTCTCTATAG 24366 || |||||| || ||||||| || || |||||| | |||| | || ||| || || | Sbjct 1339 ATTTATCCAGTTGAGAGCCCACTCAGCTTTCTTTCTGACACTACTTATATGT-TCAATTG 1281 Query 24367 CATTAAAGAGATAGtttttttCATTACT--ATCTTTAACATATGTATCAATCAAAAGACT 24424 | ||| ||| | | |||| || | |||||| | ||| || || ||||| || || Sbjct 1280 CGCCAAAAAGACGTTCTCTTTC--TAATGGATCTTTGATATAAGTGTCGATCAACAGGCT 1223 Query 24425 ATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTC 24484 |||||||| || ||||| |||||||| || ||||| | ||| || || ||||| | || Sbjct 1222 GTACATTTCTGAGTGAATATTTTCAATTGCAATTTGCAGTCCATAAAAGCATCTGACTTC 1163 Query 24485 -GGTAATCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCAC 24543 || || |||||||| | ||| | ||| | || |||||||| || || || |||| Sbjct 1162 AGGCCAT-TGTACTTCACTTGCAAAACATTCAACCAAGTTTTCATTTACAATACCATCAC 1104 Query 24544 TGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCT 24590 |||| ||||| ||||||||||||||| || ||||| |||||| ||| Sbjct 1103 TGGCAGCAAAGAACGCCAATACATGTGATACAAAATGTTTTTCTTCT 1057 >seq59245 Length=1049 Score = 120 bits (132), Expect = 4e-22 Identities = 207/299 (69%), Gaps = 4/299 (1%) Strand=Plus/Plus Query 54325 TTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCAT 54384 ||| || || | || |||| || | |||||| | ||||| || || ||||| || | Sbjct 515 TTTCGAAATGAGTGAGCATTCCTTCAGGGTATCAAAAATGCCTTCAATGCTATCGTCTTT 574 Query 54385 CATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGT 54444 ||| | ||||| || || |||||||| | | ||| || | || || || || Sbjct 575 CATAGCGACAAGAAAGCAACTGGACATTTGTGGTCTGGGAGTACCGGAGTTGAACAAAGT 634 Query 54445 AGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTC 54504 ||| | ||||| ||||||||| ||||| | || |||||| || || ||||| | || Sbjct 635 AGGTGTGGCGTGAGTAAACCATCCATCAGACATTAAATTGTAAGTTTCAATAGCGGCATC 694 Query 54505 TATATCCCATTGATGA--ATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCA 54562 ||||| ||| ||| ||||| || || || | ||| | |||||| || ||||||||| Sbjct 695 AATATC--ATTCATGTGTATTCCAACAGCCACTCTCATCAGCATGTGTTGTGGTCTTTCA 752 Query 54563 ACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATA 54621 || | | | ||| ||| ||| ||| || || |||| | ||||| || |||||||| Sbjct 753 ACAACAATATCGTTGATTCTCATCAAATACGACCTTTCAAGTGTTTTGAAGCCAAAATA 811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593209181151600