Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enteromyxum_20leei_20[genbank_20GCA_5F001455295.1_202015-12-02] 69,045 sequences; 67,975,573 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq32138 95.1 1e-14 seq27001 95.1 1e-14 seq40445 86.0 7e-12 seq12843 86.0 7e-12 >seq32138 Length=882 Score = 95.1 bits (104), Expect = 1e-14 Identities = 67/77 (87%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| || | ||||||||||||| ||||| |||||||||||||||| ||||| ||||| Sbjct 667 TCTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCACT 608 Query 60125 ATACTACCGAGGATTGA 60141 |||||| |||||| ||| Sbjct 607 ATACTAACGAGGACTGA 591 Score = 84.2 bits (92), Expect = 2e-11 Identities = 66/79 (84%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| || ||||||||||||||| ||||| | |||||||||||||| ||||| || Sbjct 404 TCTCCCCGTCAGGGAATCGAACCCCGGTCTTCTGCGTGACAGGCGGAGATACTGTAGACC 345 Query 60125 ATACTACCGAGGATTGAAT 60143 |||| | |||||||||||| Sbjct 344 ATACCAACGAGGATTGAAT 326 >seq27001 Length=909 Score = 95.1 bits (104), Expect = 1e-14 Identities = 67/77 (87%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| || | ||||||||||||| ||||| |||||||||||||||| ||||| ||||| Sbjct 216 TCTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCACT 275 Query 60125 ATACTACCGAGGATTGA 60141 |||||| |||||| ||| Sbjct 276 ATACTAACGAGGACTGA 292 Score = 84.2 bits (92), Expect = 2e-11 Identities = 66/79 (84%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| || ||||||||||||||| ||||| | |||||||||||||| ||||| || Sbjct 479 TCTCCCCGTCAGGGAATCGAACCCCGGTCTTCTGCGTGACAGGCGGAGATACTGTAGACC 538 Query 60125 ATACTACCGAGGATTGAAT 60143 |||| | |||||||||||| Sbjct 539 ATACCAACGAGGATTGAAT 557 >seq40445 Length=533 Score = 86.0 bits (94), Expect = 7e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 60076 GGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAG 60135 |||||||||||| ||||| |||||||||||||||| ||||| ||||||||||| |||| Sbjct 2 GGGAATCGAACCTCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCACTATACTAACGAG 61 Query 60136 GATTGAA 60142 ||| ||| Sbjct 62 GATAGAA 68 >seq12843 Length=731 Score = 86.0 bits (94), Expect = 7e-12 Identities = 66/77 (86%), Gaps = 1/77 (1%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 ||| ||| | |||||| |||||| |||| |||||||||||||||| |||||| ||||||| Sbjct 97 CTCTTCGACTGGGAATTGAACCCAGGTCGCCCGCGTGACAGGCGGGCATACTAACCACTA 156 Query 60126 TACTACCGAGGA-TTGA 60141 ||||| ||| || |||| Sbjct 157 TACTATCGAAGACTTGA 173 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571324085672600