Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enteromyxum_20leei_20[genbank_20GCA_5F001455295.1_202015-12-02] 69,045 sequences; 67,975,573 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq22640 340 2e-88 seq59245 125 7e-24 seq25167 120 3e-22 seq68710 93.3 4e-14 seq67756 93.3 4e-14 >seq22640 Length=3951 Score = 340 bits (376), Expect = 2e-88 Identities = 999/1528 (65%), Gaps = 86/1528 (6%) Strand=Plus/Minus Query 36790 TCAACTGTGAATTTTATAGGATTTGATGCCGATTTTGTTCTCATATAATACATTCCAGTT 36849 ||||| || |||| |||||||||| | | | ||| ||| | ||| |||||||||||| Sbjct 2333 TCAACAGTAAATTGAATAGGATTTGCACCGGGTCTTGATCTAAGATAGTACATTCCAGTT 2274 Query 36850 TTTAGCCCCAATCTCCATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATGTAGGATTA 36909 || || ||| ||||||||||||||||||| || || |||||| || || ||| | | Sbjct 2273 TTGAGGCCCTTATTCCATCCGTAAAAATGCATGCTAGTAAGTTTTCCGACTGAAGGTTCA 2214 Query 36910 TCTATATATATTGTCATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCATT 36969 | ||| | | | | |||||||||||||| ||||| | ||| | || || ||||| Sbjct 2213 GCCATAAAAACGTTGAAAGATTGACTTTGATCAATAAAAGGACCACGATCAGCAGCCATA 2154 Query 36970 TCTAAAATACAT-TTTTGA--GATATCTCCCAAACCGTTTTATATATTTGTTTTATATTA 37026 || |||| | |||| | || | ||||| |||||||| | |||||| | Sbjct 2153 TC---AATAAGTGTTTTCATTGAAAGTTCCCATGAGGTTTTATAAAGAGCTTTTATGTCG 2097 Query 37027 TCTGGTA-------AAT---CTAAA----------TGTTG-------AATA--------G 37051 || || | ||| ||||| ||||| |||| | Sbjct 2096 TCAGGAATGCAATCAATGTTCTAAAAAAAATAAAGTGTTGTCATTAAAATACTTGAACGG 2037 Query 37052 AACCATTATGTAACA-CAATTGTATTCTTTATGTCATT-ATTCCACATATTTCTACTTAT 37109 | ||| || | | || ||| ||| |||| | || |||||| || || | | | Sbjct 2036 AGCCAAAATTTGCAATCAGTTG-ATT-TTTAACACTTTCATTCCAGATGTTGAGATTAAC 1979 Query 37110 TAGTTCTCTCA----ATAGGTGTGGATTTACAACCTGAAAATCTCCAGATAATACTCTTC 37165 || ||| || ||| ||| | |||| |||||| || |||||||| || | || Sbjct 1978 AAGGTCTTGCAGCAAATACTTGT----TCACAATCTGAAATTCCCCAGATAAAACACGTC 1923 Query 37166 TTGTATATATATTGCTAGTATATGGTTCAATGGACTCATTATTACTTAATATTTGAGATG 37225 |||| ||||| | ||||| |||||||| || || || || | | ||||||||| | Sbjct 1922 GATTATAAATATTTGTTGTATAAGGTTCAATAGATTCGTTGTTTCCCATTATTTGAGACG 1863 Query 37226 TAGATGCAGTAGGCATTGGTGCTATTAGAAGGCTATTTCTCAATCCATGTGTATTAATTC 37285 | || || |||||||||||||| |||| ||| |||||||| | |||||| || ||| Sbjct 1862 TTGACGCCGTAGGCATTGGTGCAATTAAAAGACTATTTCTAACACCATGTTCCTTGATTT 1803 Query 37286 TCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTGGGTTCTTTAACCACATATCATATT 37345 | ||| | | ||||||||||||||||| || || | | |||||| ||||||| Sbjct 1802 TAGCTTTCAATGATTTCCAATCCCATAAATCAGTAGGAGTAATATTCCACATGTCATATT 1743 Query 37346 GTAGAATACCTTTACTCGCTGGAGAATCGTTATATGTCTCATAAGGTCCGTAAATTTTAG 37405 ||| ||||||| | || ||||| || || || || || | ||| | Sbjct 1742 GTAAGATACCTTGAGATATGGGTGAATCTTTGTAAGTGGAGTATACGCCATGTTCTTTTG 1683 Query 37406 CTAGTTCGCAACTAGATTCTAGTGCGGCATAATATATTGTTTCGAAAATTTGTATATTTA 37465 || ||| || ||| || |||||||||| |||||||||||| || |||| ||||| | Sbjct 1682 CTTCTTCACATGAAGACTCAAGTGCGGCATGATATATTGTTTCAAATATTTCAATATTCA 1623 Query 37466 ATATTTTTGCTTCTTCGCTATCGAAT-GCATAGCCCAATAATATAAACACATCAGCCAAA 37524 | | | |||||| ||||||||||| |||| | | | || || ||||||| | | Sbjct 1622 ACTTCCTGGCTTCTGCGCTATCGAATGGCAT-TCTAAGTTTGATGAATGCATCAGCAAGA 1564 Query 37525 CCCTGAACACCGATACCTATGGGTCTATGTTTCTTATTAGATCTAGACGATTCTATCACT 37584 || || || || || |||| |||||||| | |||| || | | |||||| || Sbjct 1563 CCTTGTACGCCAATTCCTACAGGTCTATGACGCATATTTGAATTTTTTGCTTCTATAACG 1504 Query 37585 GGATAATAATTGATATCTATTATTTTATTTAGATTTTTAACTAGTATTTTCGTAATTATT 37644 ||||| |||| | ||| ||||| ||||| | || ||||||| || ||| || | | Sbjct 1503 GGATAGAAATTCAAATCAATTATCTTATTCAAGTTCTTAACTATTACTTTTGTGA-CCTC 1445 Query 37645 CTCAA-CTTGTCGAACATAAATACGTTATTATTA------ACAAATTT--ACTCAACGAA 37695 | || ||| | ||| |||| ||| ||||| || |||| | | ||| || Sbjct 1444 ATGAAGCTTTTTGAAATGAAATGTTTTAGTATTATCTTTTTCAGATTTTGAATAAACAAA 1385 Query 37696 -------------ATAGATCCTAGATTACATACAGCAACTTCATCTTCGTTACTAAATTG 37742 ||||| |||| || || ||||| |||||||| | | | | Sbjct 1384 CTTCGGCAGACATATAGAAGCTAGGTTGCACACAGCGGTTTCATCTTTATCAGAGTACTC 1325 Query 37743 TATAATCTCTGTACAGAGATTACTCGATCTAATTGTTCCCAAATTGCTTTGATTGGATTT 37802 | ||| || ||||| | ||| || || | || ||| | ||| ||||||| ||||| Sbjct 1324 AACAATTTCAGTACACAAATTGCTTGACTTGATCACTCCAACATTTTTTTGATTAGATTT 1265 Query 37803 TTTATTACAAGAATCTTTATATAGTATATACGGCGTTCCTTGTTCTATTTGAGCCTCGAT 37862 ||| || | |||||| || | || || ||| | || |||||||||||| || | Sbjct 1264 GCGATTGCATGCATCTTTGTAAACCATGTATGGCATACCAGTTTCTATTTGAGCTTCCAA 1205 Query 37863 AATAGATTTCCATAAACTTCTTGCTTTAACGATCGCTT----TAAtttttttCTTTGTTT 37918 |||||| ||| ||| || |||| | |||| ||| |||||| | || Sbjct 1204 AATAGAAAACCACAAAGCCTGAGCGTTAA--TTTGCTTCTTATAACGTTTTTC--AGATT 1149 Query 37919 CGTATTCTATATATAATTTGTTAAAATCATTCCCCCATACATCGCATAATCCTGGACATT 37978 | || | | | || | || ||||| || | || | ||| |||||||||| ||| Sbjct 1148 CATACTTTGTGTAAAGCTTATTAAATTCTTCACCGTAGCAATCAGATAATCCTGGTGATT 1089 Query 37979 CGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCAG 38038 | ||||||||| | |||||| | ||||| |||| ||| || |||||||||||||| | Sbjct 1088 CATGTGGACACATCAAAGACCACTTTTCATTATTTTTTACACGCTCCATAAATAAATCCG 1029 Query 38039 GTACCCATAATGCAGTAAATAAATCTTTGGTTCTATATTCTTCGTTCCCTACATTCTTTC 38098 ||| |||||||||| ||| || ||| | | | ||||||| | || || |||| Sbjct 1028 GTATCCATAATGCATAAAACAAGTCTCTAGCGCGTACTTCTTCGCTGCCAGTGTTTTTTC 969 Query 38099 TTAAGCTTAGAAAATCGAATATATCAGCGTGCCATGGTTCTATATAAATCGACATTGCTC 38158 | || || ||| || |||||| | |||||| ||||| | |||| | | || | Sbjct 968 TCAATTCTAAAAATTCTTTTATATCTGAGTGCCACGGTTCGAGGTAAACAGCAAATGAAC 909 Query 38159 CTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTATTATATATTCTTAACA 38218 | || | |||| || || |||| | ||||| ||||| || || | ||| |||| Sbjct 908 CAGGGCGCTTATTTCCACCTTGATCTACGTATCTGGACGTGTTGTTGTACACTCTCAACA 849 Query 38219 TAGGTACTATACCATTAGATTTGCCGTT 38246 || |||| ||||| ||| | || || Sbjct 848 ACGGAACTAATCCATTTGATATTCCATT 821 Score = 125 bits (138), Expect = 7e-24 Identities = 227/332 (68%), Gaps = 0/332 (0%) Strand=Plus/Minus Query 38296 CCTATTCCACCTGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAATATACCT 38355 || |||||||| |||| ||| || || | | ||||| || | |||||||| || ||| Sbjct 552 CCAATTCCACCGGCATATTTCGAAATGAGTGAGCATTCCTTCAGGGTATCAAAAATGCCT 493 Query 38356 TCTATACTGTCATCCTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGTT 38415 || || || || || || || | | | ||| ||||| |||||||| || ||||| Sbjct 492 TCAATGCTATCGTCTTTCATAGCGACAAGAAAGCAACTGGACATTTGTGGTCTGGGAGTA 433 Query 38416 CCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATAATTATAT 38475 |||| ||| || || ||||| | || || | |||||| || |||| |||| || Sbjct 432 CCGGAGTTGAACAAAGTAGGTGTGGCGTGAGTAAACCATCCATCAGACATTAAATTGTAA 373 Query 38476 GTTTCTATTACATCATCTATATCACCGCCGTGAATACCTAGAGATACCCTCATTAGCATA 38535 ||||| || | |||| |||||| ||| || || | || || ||||| ||||| Sbjct 372 GTTTCAATAGCGGCATCAATATCATTCATGTGTATTCCAACAGCCACTCTCATCAGCATG 313 Query 38536 TGTTGTGGTCTTTCTATTATTTTATTATTCTGTTTAAGTAGATACGATTTTTCTAATGTT 38595 |||||||||||||| | | ||| || | | | | |||||| |||| | |||| Sbjct 312 TGTTGTGGTCTTTCAACAACAATATCGTTGATTCTCATCAAATACGACCTTTCAAGTGTT 253 Query 38596 TTTATTCCAAAATAACTATATGAATAATCTCT 38627 || | |||||||| ||| ||||||||| Sbjct 252 TTGAAGCCAAAATATGAATAGCTATAATCTCT 221 >seq59245 Length=1049 Score = 125 bits (138), Expect = 7e-24 Identities = 227/332 (68%), Gaps = 0/332 (0%) Strand=Plus/Plus Query 38296 CCTATTCCACCTGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAATATACCT 38355 || |||||||| |||| ||| || || | | ||||| || | |||||||| || ||| Sbjct 498 CCAATTCCACCGGCATATTTCGAAATGAGTGAGCATTCCTTCAGGGTATCAAAAATGCCT 557 Query 38356 TCTATACTGTCATCCTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGTT 38415 || || || || || || || | | | ||| ||||| |||||||| || ||||| Sbjct 558 TCAATGCTATCGTCTTTCATAGCGACAAGAAAGCAACTGGACATTTGTGGTCTGGGAGTA 617 Query 38416 CCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATAATTATAT 38475 |||| ||| || || ||||| | || || | |||||| || |||| |||| || Sbjct 618 CCGGAGTTGAACAAAGTAGGTGTGGCGTGAGTAAACCATCCATCAGACATTAAATTGTAA 677 Query 38476 GTTTCTATTACATCATCTATATCACCGCCGTGAATACCTAGAGATACCCTCATTAGCATA 38535 ||||| || | |||| |||||| ||| || || | || || ||||| ||||| Sbjct 678 GTTTCAATAGCGGCATCAATATCATTCATGTGTATTCCAACAGCCACTCTCATCAGCATG 737 Query 38536 TGTTGTGGTCTTTCTATTATTTTATTATTCTGTTTAAGTAGATACGATTTTTCTAATGTT 38595 |||||||||||||| | | ||| || | | | | |||||| |||| | |||| Sbjct 738 TGTTGTGGTCTTTCAACAACAATATCGTTGATTCTCATCAAATACGACCTTTCAAGTGTT 797 Query 38596 TTTATTCCAAAATAACTATATGAATAATCTCT 38627 || | |||||||| ||| ||||||||| Sbjct 798 TTGAAGCCAAAATATGAATAGCTATAATCTCT 829 >seq25167 Length=1585 Score = 120 bits (132), Expect = 3e-22 Identities = 198/283 (70%), Gaps = 2/283 (1%) Strand=Plus/Minus Query 11806 TATCCATTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCCATTGTTTCTATAGCGTT 11865 |||||| || ||||| |||||||||||| | || | || ||| || ||| Sbjct 1336 TATCCAGTTGAGAGCCCACTCAGCTTTCTTTCTGACACTACTTATATGTTCAATTGCGCC 1277 Query 11866 AAATAAATGCATTTTTTCTATATTATCTCTTACATATGTATCTATTAATAAACTATACAT 11925 ||| | | | | |||||| |||| | | ||| || || || || | || ||||| Sbjct 1276 AAAAAGACGTTCTCTTTCTAATGGATCTTTGATATAAGTGTCGATCAACAGGCTGTACAT 1217 Query 11926 TTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACATCGTGCCTCTGAACA 11985 |||||| ||||||||||| || || ||||| | |||||| || |||| | || | || Sbjct 1216 TTCTGAGTGAATATTTTCAATTGCAATTTGCAGTCCATAAAAGCATCTGACTTCAGGCCA 1157 Query 11986 CTGTACATCCACATA-AAATCTTTCCGCTAAATTCTCATTTACAATACCATCACTAGATG 12044 ||||| || || | ||| | ||| | || || |||||||||||||||||||| | | Sbjct 1156 TTGTACTTC-ACTTGCAAAACATTCAACCAAGTTTTCATTTACAATACCATCACTGGCAG 1098 Query 12045 CAAAAAATGCTAGTATATGTTTTATAAAGTATTTTTCGTCTTT 12087 |||| || || | || |||| || ||| | |||||| ||||| Sbjct 1097 CAAAGAACGCCAATACATGTGATACAAAATGTTTTTCTTCTTT 1055 Score = 86.0 bits (94), Expect = 6e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 11707 tttttttATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGC 11766 ||| |||| |||||| || |||||||| |||||||| || |||||||||||||| |||| Sbjct 1528 TTTCTTTAGCCAAAAAATGGCAGCAAACGAACCAGAGAAAAATATTCCCTCCACTACTGC 1469 Query 11767 AAATGCTACTACTCT 11781 ||| ||||| ||||| Sbjct 1468 AAAAGCTACAACTCT 1454 >seq68710 Length=718 Score = 93.3 bits (102), Expect = 4e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 11654 TCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGttttttt 11713 |||||||| || || || || || || || || | |||||||||| |||| || || Sbjct 328 TCGTCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCTCTTCTTC 387 Query 11714 ATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCT 11773 | ||| || || ||||| || |||||||| ||||| |||||||||||||| || || || Sbjct 388 AGCCAGAAGATGGCAGCGAAGGAACCAGAGAAGAAGATTCCCTCCACAGCAGCGAAGGCC 447 Query 11774 ACTACTCTTTCTCC 11787 || || | ||||| Sbjct 448 ACCACACGCTCTCC 461 >seq67756 Length=723 Score = 93.3 bits (102), Expect = 4e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 11654 TCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGttttttt 11713 |||||||| || || || || || || || || | |||||||||| |||| || || Sbjct 391 TCGTCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCTCTTCTTC 332 Query 11714 ATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCT 11773 | ||| || || ||||| || |||||||| ||||| |||||||||||||| || || || Sbjct 331 AGCCAGAAGATGGCAGCGAAGGAACCAGAGAAGAAGATTCCCTCCACAGCAGCGAAGGCC 272 Query 11774 ACTACTCTTTCTCC 11787 || || | ||||| Sbjct 271 ACCACACGCTCTCC 258 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468120433814800