Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enteromyxum_20leei_20[genbank_20GCA_5F001455295.1_202015-12-02] 69,045 sequences; 67,975,573 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq22640 168 9e-37 seq25167 143 4e-29 seq59245 127 3e-24 >seq22640 Length=3951 Score = 168 bits (186), Expect = 9e-37 Identities = 730/1142 (64%), Gaps = 43/1142 (4%) Strand=Plus/Minus Query 65184 TGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGAC 65243 |||||||| ||||| || || | ||| | |||||||| | ||||| ||||| | ||| Sbjct 1947 TGAAATTCCCCAGATAAAACACGTCGATTATAAATATTTGTTGTATAAGGTTCAATAGAT 1888 Query 65244 TCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTA 65303 || || ||||||| ||||||| ||||| || || ||||| ||||| | || | |||| Sbjct 1887 TCGTTGTTTCCCATTATTTGAGACGTTGACGCCGTAGGCATTGGTGCAATTAAAAGACTA 1828 Query 65304 TTTCTAAGACCGTATGTTC--TGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCG 65361 ||||||| ||| |||||| |||||||| |||| | | || ||||| ||| | ||| | Sbjct 1827 TTTCTAACACC--ATGTTCCTTGATTTTAGCTTTCAATGATTTCCAATCCCATAAATCAG 1770 Query 65362 ACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTA---CTGGCGTACGATCCTA 65418 || || ||||| ||||| | | ||| || || || Sbjct 1769 TAGGAGTAATATTCCACATGTCATATTGTAAGATACCTTGAGATATGG-GT--GAATCTT 1713 Query 65419 CATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGT 65478 || || |||| || | | | ||| |||||| | ||| | ||| | | Sbjct 1712 TGTAAGTGGAGTATACGCCATGTTCTTTTGCTTCTTCACATGAAGACTCAAGTGCGGCAT 1653 Query 65479 AATAAATGGTTTCGAAGATCTTCTTATT-TAGATCTTGTGCTTCCAGGCTATCAAATGGA 65537 ||| || ||||| || || | |||| | || || ||||| |||||| ||||| Sbjct 1652 GATATATTGTTTCAAATATTTCAATATTCAACTTCCTG-GCTTCTGCGCTATCGAATGG- 1595 Query 65538 TAATTTAAG-AGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATG 65596 | | |||| || || || || || | ||||| || ||||| || | ||||||||| Sbjct 1594 CATTCTAAGTTTGATGAATGCATCAGCAAGACCTTGTACGCCAATTCCTACAGGTCTATG 1535 Query 65597 TCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATT 65656 | | |||| || ||| |||||| || ||||| |||| | ||| || || ||||| Sbjct 1534 ACGCATATTTGAATTTTTTGCTTCTATAACGGGATAGAAATTCAAATCAATTATCTTATT 1475 Query 65657 GAGATTTCTGACAATTACTT---TGACCACATCCTTCAGTTTGAGA--AAATCAAATCG- 65710 | || | || ||||||| ||||| ||| | ||||| | |||| | | Sbjct 1474 CAAGTTCTTAACTATTACTTTTGTGACCTCATGAAGCTTTTTGAAATGAAATGTTTTAGT 1415 Query 65711 CTCATCTATTACAAACATGTTCAAT------------GCA-----ACAGATGCCAGATTA 65753 | |||| || | | || || ||| ||| | ||| || || || Sbjct 1414 ATTATCTTTTTC--AGATTTTGAATAAACAAACTTCGGCAGACATATAGAAGCTAGGTTG 1357 Query 65754 CAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACAC 65813 || || || |||| ||| | || | | || ||||| || | ||| || || Sbjct 1356 CACACAGCGGTTTCATCTTTATCAGAGTACTCAACAATTTCAGTACACAAATTGCTTGAC 1297 Query 65814 TTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATG 65873 ||||| ||| | ||||| ||||||| || || || ||||| || |||| ||| Sbjct 1296 TTGATCACTCCAACATTTTTTTGATTAGATTTGCGATTGCATGCATCTTTGTAAACCATG 1237 Query 65874 AATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTT 65933 |||| |||||||||| || |||| ||| | ||| | ||| | | |||| || Sbjct 1236 TATGGCATACCAGTTTCTATTTGAGCTTCCAAAATAGAAAACCACAAAGCCTGAGCGTTA 1177 Query 65934 ATTATAGATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGT-TCGAACTCGTC 65992 ||| || || | ||||| ||| || ||| || || | | | || || || Sbjct 1176 ATTTGCTTCTTATAACGTTTTTCAGATTCATACTTTGTGTA-AAGCTTATTAAATTCTTC 1118 Query 65993 TCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTC 66052 || | || ||||| || |||||| ||||||||||| ||||||| | | | Sbjct 1117 ACCGTAGCAATCAGATAATCCTGGTGATTCATGTGGACACATCAAAGACCACTTTTCATT 1058 Query 66053 ATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGT 66112 || || || || | |||||| | ||| || ||||| | || ||| || ||||| | Sbjct 1057 ATTTTTTACACGCTCCATAAATAAATCCGGTATCCATAATGCATAAAACAAGTCTCTAGC 998 Query 66113 TCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATG 66172 | ||| ||| | || || || ||| | | || | || | | ||||| | || Sbjct 997 GCGTACTTCTTCGCTGCCAGTGTTTTTTCTCAATTCTAAAAATTCTTTTATATCTGAGTG 938 Query 66173 CCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTA 66232 ||||||||| | ||| | || | ||||| || || ||||| || ||||||| ||| Sbjct 937 CCACGGTTCGAGGTAAACAGCAAATGAACCAGGGCGCTTATTTCCACCTTGATCTACGTA 878 Query 66233 TCTAGCGGTGTTATTATAAACTCTCAACATTGGAA-TAATACCATTGGATGTACCATTGG 66291 ||| | ||||| || || |||||||||| |||| |||| ||||| ||| | ||||| | Sbjct 877 TCTGGACGTGTTGTTGTACACTCTCAACAACGGAACTAAT-CCATTTGATATTCCATTAG 819 Query 66292 TC 66293 || Sbjct 818 TC 817 Score = 127 bits (140), Expect = 3e-24 Identities = 219/316 (69%), Gaps = 4/316 (1%) Strand=Plus/Minus Query 66339 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCC 66398 || ||||| || || ||| || || | || |||| || | |||||| | ||||| Sbjct 552 CCAATTCCACCGGCATATTTCGAAATGAGTGAGCATTCCTTCAGGGTATCAAAAATGCCT 493 Query 66399 TCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTT 66458 || || ||||| || |||| | ||||| || || |||||||| | | ||| Sbjct 492 TCAATGCTATCGTCTTTCATAGCGACAAGAAAGCAACTGGACATTTGTGGTCTGGGAGTA 433 Query 66459 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTAC 66518 || | || || || ||||| | ||||| ||||||||| ||||| | || |||||| Sbjct 432 CCGGAGTTGAACAAAGTAGGTGTGGCGTGAGTAAACCATCCATCAGACATTAAATTGTAA 373 Query 66519 GTCTCAATAGCTGAGTCTATATCCCATTGATGA--ATTCCTACTGCGACACGCATTAACA 66576 || |||||||| | || ||||| ||| ||| ||||| || || || | ||| | || Sbjct 372 GTTTCAATAGCGGCATCAATATC--ATTCATGTGTATTCCAACAGCCACTCTCATCAGCA 315 Query 66577 TGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAG 66636 |||| || ||||||||||| | | | ||| ||| ||| ||| || || |||| | | Sbjct 314 TGTGTTGTGGTCTTTCAACAACAATATCGTTGATTCTCATCAAATACGACCTTTCAAGTG 255 Query 66637 TTTTAAAACCAAAATA 66652 |||| || |||||||| Sbjct 254 TTTTGAAGCCAAAATA 239 Score = 96.9 bits (106), Expect = 5e-15 Identities = 167/241 (69%), Gaps = 4/241 (2%) Strand=Plus/Minus Query 64817 TTTTATTTTATCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAG 64876 ||| |||||||| | || | || |||||||| ||| | ||||| | | | || Sbjct 2349 TTTAATTTTATCGGTATCAACAGTAAATTGAATAGGATTTGCACCGGGTCTTGATCTAAG 2290 Query 64877 ATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTT 64936 |||||||||||| ||||| || || | ||||||||||||||||||| || || ||||| Sbjct 2289 ATAGTACATTCCAGTTTTGAGGCCCTTATTCCATCCGTAAAAATGCATGCTAGTAAGTTT 2230 Query 64937 --GGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCT 64994 || | | || || || ||| | || | ||||||||||||||| || || | Sbjct 2229 TCCGACTGA--AGGTTCAGCCATAAAAACGTTGAAAGATTGACTTTGATCAATAAAAGGA 2172 Query 64995 CCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAA 65054 || | || |||||||| | || | || || || || |||||| ||||||||| Sbjct 2171 CCACGATCAGCAGCCATATCAATAAGTGTTTTCATTGAAAGTTCCCATGAGGTTTTATAA 2112 Query 65055 A 65055 | Sbjct 2111 A 2111 >seq25167 Length=1585 Score = 143 bits (158), Expect = 4e-29 Identities = 206/283 (73%), Gaps = 8/283 (3%) Strand=Plus/Minus Query 36331 ATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCAT-TGTCTCTATAG 36389 || |||||| || ||||||| || || |||||| | |||| | || ||| || || | Sbjct 1339 ATTTATCCAGTTGAGAGCCCACTCAGCTTTCTTTCTGACACTACTTATATGT-TCAATTG 1281 Query 36390 CATTAAAGAGATAGtttttttCATTACT--ATCTTTAACATATGTATCAATCAAAAGACT 36447 | ||| ||| | | |||| || | |||||| | ||| || || ||||| || || Sbjct 1280 CGCCAAAAAGACGTTCTCTTTC--TAATGGATCTTTGATATAAGTGTCGATCAACAGGCT 1223 Query 36448 ATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTC 36507 |||||||| || ||||| |||||||| || ||||| | ||| || || ||||| | || Sbjct 1222 GTACATTTCTGAGTGAATATTTTCAATTGCAATTTGCAGTCCATAAAAGCATCTGACTTC 1163 Query 36508 -GGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCAC 36566 || || |||||||| | ||| | ||| | || |||||||| || || || |||| Sbjct 1162 AGGCCAT-TGTACTTCACTTGCAAAACATTCAACCAAGTTTTCATTTACAATACCATCAC 1104 Query 36567 TGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTC 36609 |||| ||||| ||||||||||||||| || ||||| |||||| Sbjct 1103 TGGCAGCAAAGAACGCCAATACATGTGATACAAAATGTTTTTC 1061 >seq59245 Length=1049 Score = 127 bits (140), Expect = 3e-24 Identities = 219/316 (69%), Gaps = 4/316 (1%) Strand=Plus/Plus Query 66339 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCC 66398 || ||||| || || ||| || || | || |||| || | |||||| | ||||| Sbjct 498 CCAATTCCACCGGCATATTTCGAAATGAGTGAGCATTCCTTCAGGGTATCAAAAATGCCT 557 Query 66399 TCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTT 66458 || || ||||| || |||| | ||||| || || |||||||| | | ||| Sbjct 558 TCAATGCTATCGTCTTTCATAGCGACAAGAAAGCAACTGGACATTTGTGGTCTGGGAGTA 617 Query 66459 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTAC 66518 || | || || || ||||| | ||||| ||||||||| ||||| | || |||||| Sbjct 618 CCGGAGTTGAACAAAGTAGGTGTGGCGTGAGTAAACCATCCATCAGACATTAAATTGTAA 677 Query 66519 GTCTCAATAGCTGAGTCTATATCCCATTGATGA--ATTCCTACTGCGACACGCATTAACA 66576 || |||||||| | || ||||| ||| ||| ||||| || || || | ||| | || Sbjct 678 GTTTCAATAGCGGCATCAATATC--ATTCATGTGTATTCCAACAGCCACTCTCATCAGCA 735 Query 66577 TGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAG 66636 |||| || ||||||||||| | | | ||| ||| ||| ||| || || |||| | | Sbjct 736 TGTGTTGTGGTCTTTCAACAACAATATCGTTGATTCTCATCAAATACGACCTTTCAAGTG 795 Query 66637 TTTTAAAACCAAAATA 66652 |||| || |||||||| Sbjct 796 TTTTGAAGCCAAAATA 811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657604755737800