Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enteromyxum_20leei_20[genbank_20GCA_5F001455295.1_202015-12-02] 69,045 sequences; 67,975,573 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq22640 197 2e-45 seq25167 150 2e-31 seq59245 127 3e-24 seq7759 91.5 2e-13 seq68710 87.8 2e-12 seq67756 87.8 2e-12 >seq22640 Length=3951 Score = 197 bits (218), Expect = 2e-45 Identities = 732/1138 (64%), Gaps = 35/1138 (3%) Strand=Plus/Minus Query 71146 TGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGAC 71205 |||||||| ||||| || || | ||| | |||||||| | ||||| ||||| | || Sbjct 1947 TGAAATTCCCCAGATAAAACACGTCGATTATAAATATTTGTTGTATAAGGTTCAATAGAT 1888 Query 71206 TCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTA 71265 || || ||||||| ||||||| ||||| || || ||||| ||||| | || |||||| Sbjct 1887 TCGTTGTTTCCCATTATTTGAGACGTTGACGCCGTAGGCATTGGTGCAATTAAAAGACTA 1828 Query 71266 TTTCTAAGACCATGTGATCGGATTTTATCTTTTAGAGATTCCCAATTCCAAAGATCCGAT 71325 ||||||| ||||||| ||||||| |||| | |||| ||||| ||| | ||| | Sbjct 1827 TTTCTAACACCATGTTCCTTGATTTTAGCTTTCAATGATTTCCAATCCCATAAATCAGTA 1768 Query 71326 GGTACAACNNNNNNNNNNNNNNNNNNNNNNATGCCGTTACTAGCGTATGATCCTGCATAT 71385 || || || || | | | ||| || || Sbjct 1767 GGAGTAATATTCCACATGTCATATTGTAAGATACCTTGAGATATGGGTGAATCTTTGTAA 1708 Query 71386 GTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCATAATAA 71445 || |||| || | || || ||| |||||| | ||| | ||| ||| ||| Sbjct 1707 GTGGAGTATACGCCATGTTCTTTTGCTTCTTCACATGAAGACTCAAGTGCGGCATGATAT 1648 Query 71446 ATGGTTTCGAAAATCTTCTTATTGAGAT-CTTGTGCTTCCGGGCTATCAAATGGATAATT 71504 || ||||| || || | |||| | | | || ||||| | |||||| ||||| | | Sbjct 1647 ATTGTTTCAAATATTTCAATATTCAACTTCCTG-GCTTCTGCGCTATCGAATGGC-ATTC 1590 Query 71505 TAAGAGA-ATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCTCT 71563 |||| || || || || || | ||||| |||||||| || | |||||| || | | Sbjct 1589 TAAGTTTGATGAATGCATCAGCAAGACCTTGTACGCCAATTCCTACAGGTCTATGACGCA 1530 Query 71564 TATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGAT 71623 |||| ||| ||| |||||| || ||||| |||| | ||| || || ||||| | | Sbjct 1529 TATTTGAATTTTTTGCTTCTATAACGGGATAGAAATTCAAATCAATTATCTTATTCAAGT 1470 Query 71624 TTCTGACTATTACTTT---GACCACATC---CTTTAGTTTGA---GAAA---------AT 71665 | | ||||||||||| |||| ||| |||| |||| |||| || Sbjct 1469 TCTTAACTATTACTTTTGTGACCTCATGAAGCTTT---TTGAAATGAAATGTTTTAGTAT 1413 Query 71666 CAAATCTCCCATCTATT--ACAAACACG-TTCA--AGGCA-ACAGATGCCAGATTACAAA 71719 | | | || | || | ||||| ||| || || | ||| || || || || | Sbjct 1412 TATCTTTTTCAGATTTTGAATAAACAAACTTCGGCAGACATATAGAAGCTAGGTTGCACA 1353 Query 71720 CGGCTACCTCATTAGCATCGGCATATTGTATAATTTCAGTGCAAAGATTACTACACTTGA 71779 | || |||| ||| | || | | ||||||||| || | ||| || |||||| Sbjct 1352 CAGCGGTTTCATCTTTATCAGAGTACTCAACAATTTCAGTACACAAATTGCTTGACTTGA 1293 Query 71780 TGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACG 71839 | ||| | ||||| ||||||| || || || ||||| || |||| || | | Sbjct 1292 TCACTCCAACATTTTTTTGATTAGATTTGCGATTGCATGCATCTTTGTAAACCATGTATG 1233 Query 71840 GAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTA 71899 | |||||||||| || |||| ||| | ||| | ||| | | |||| || ||| Sbjct 1232 GCATACCAGTTTCTATTTGAGCTTCCAAAATAGAAAACCACAAAGCCTGAGCGTTAATTT 1173 Query 71900 TATTCTTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGT-TCGAACTCGTCTCCC 71958 ||||| || | ||||| ||| || | ||| || || | | | || || || || Sbjct 1172 GCTTCTTATAACGTTTTTCAGATTCATACTTTGTGTA-AAGCTTATTAAATTCTTCACCG 1114 Query 71959 CAAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCA 72018 | || |||||| || |||||| ||||||||||| ||||||| | ||| || Sbjct 1113 TAGCAATCAGATAATCCTGGTGATTCATGTGGACACATCAAAGACCACTTTTCATTATTT 1054 Query 72019 TTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTA 72078 ||||| || | |||||| | ||| || ||||| | || ||| | ||||| | | Sbjct 1053 TTTACACGCTCCATAAATAAATCCGGTATCCATAATGCATAAAACAAGTCTCTAGCGCGT 994 Query 72079 TGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCAC 72138 || ||| | || || || ||| | | || | || | | ||||| || |||||| Sbjct 993 ACTTCTTCGCTGCCAGTGTTTTTTCTCAATTCTAAAAATTCTTTTATATCTGAGTGCCAC 934 Query 72139 GGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTA 72198 ||||| | ||| | || | || || || || ||||| || ||||||| |||||| Sbjct 933 GGTTCGAGGTAAACAGCAAATGAACCAGGGCGCTTATTTCCACCTTGATCTACGTATCTG 874 Query 72199 GCGGTGTTATTATAAACTCTCAACATTGGAA-TAATACCATTGGATGCACCATTGGTC 72255 | ||||| || || |||||||||| |||| |||| ||||| ||| ||||| ||| Sbjct 873 GACGTGTTGTTGTACACTCTCAACAACGGAACTAAT-CCATTTGATATTCCATTAGTC 817 Score = 127 bits (140), Expect = 3e-24 Identities = 219/316 (69%), Gaps = 4/316 (1%) Strand=Plus/Minus Query 72301 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCC 72360 || ||||| || || ||| || || | || |||| || | |||||| | ||||| Sbjct 552 CCAATTCCACCGGCATATTTCGAAATGAGTGAGCATTCCTTCAGGGTATCAAAAATGCCT 493 Query 72361 TCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTT 72420 || || ||||| || |||| | ||||| || || |||||||| | | ||| Sbjct 492 TCAATGCTATCGTCTTTCATAGCGACAAGAAAGCAACTGGACATTTGTGGTCTGGGAGTA 433 Query 72421 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTAC 72480 || | || || || ||||| | ||||| ||||||||| ||||||| || |||||| Sbjct 432 CCGGAGTTGAACAAAGTAGGTGTGGCGTGAGTAAACCATCCATCAGACATTAAATTGTAA 373 Query 72481 GTCTCAATAGCTGATTCTATATCCCATTGATGT--ATTCCTACCGCGACACGCATTAACA 72538 || |||||||| | || ||||| ||| |||| ||||| || || || | ||| | || Sbjct 372 GTTTCAATAGCGGCATCAATATC--ATTCATGTGTATTCCAACAGCCACTCTCATCAGCA 315 Query 72539 TATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAG 72598 | || || ||||||||||| | | | || ||| ||| ||| || || |||| | | Sbjct 314 TGTGTTGTGGTCTTTCAACAACAATATCGTTGATTCTCATCAAATACGACCTTTCAAGTG 255 Query 72599 TTTTAAAACCAAAATA 72614 |||| || |||||||| Sbjct 254 TTTTGAAGCCAAAATA 239 >seq25167 Length=1585 Score = 150 bits (166), Expect = 2e-31 Identities = 205/284 (72%), Gaps = 4/284 (1%) Strand=Plus/Minus Query 42238 ATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGC 42297 || |||||| || ||||||| || || |||||| | |||| | || ||| || || Sbjct 1339 ATTTATCCAGTTGAGAGCCCACTCAGCTTTCTTTCTGACACTACTTATATGTTCAATTGC 1280 Query 42298 ATTAAAGAGATAGtttttttCATTACT--ATCTTTAACATATGTATCGATCAAAAGACTA 42355 ||| ||| | | |||| || | |||||| | ||| || |||||||| || || Sbjct 1279 GCCAAAAAGACGTTCTCTTTC--TAATGGATCTTTGATATAAGTGTCGATCAACAGGCTG 1222 Query 42356 TACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCG 42415 ||||||||||| ||||| |||||||| || || || | ||| || || |||||| | || Sbjct 1221 TACATTTCTGAGTGAATATTTTCAATTGCAATTTGCAGTCCATAAAAGCATCTGACTTCA 1162 Query 42416 GTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTG 42475 | |||||||| | ||| | |||| | || ||||| || || || || |||||| Sbjct 1161 GGCCATTGTACTTCACTTGCAAAACATTCAACCAAGTTTTCATTTACAATACCATCACTG 1102 Query 42476 GCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTC 42519 || ||||| ||||||||||||||| || ||||| |||||| || Sbjct 1101 GCAGCAAAGAACGCCAATACATGTGATACAAAATGTTTTTCTTC 1058 >seq59245 Length=1049 Score = 127 bits (140), Expect = 3e-24 Identities = 219/316 (69%), Gaps = 4/316 (1%) Strand=Plus/Plus Query 72301 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCC 72360 || ||||| || || ||| || || | || |||| || | |||||| | ||||| Sbjct 498 CCAATTCCACCGGCATATTTCGAAATGAGTGAGCATTCCTTCAGGGTATCAAAAATGCCT 557 Query 72361 TCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTT 72420 || || ||||| || |||| | ||||| || || |||||||| | | ||| Sbjct 558 TCAATGCTATCGTCTTTCATAGCGACAAGAAAGCAACTGGACATTTGTGGTCTGGGAGTA 617 Query 72421 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTAC 72480 || | || || || ||||| | ||||| ||||||||| ||||||| || |||||| Sbjct 618 CCGGAGTTGAACAAAGTAGGTGTGGCGTGAGTAAACCATCCATCAGACATTAAATTGTAA 677 Query 72481 GTCTCAATAGCTGATTCTATATCCCATTGATGT--ATTCCTACCGCGACACGCATTAACA 72538 || |||||||| | || ||||| ||| |||| ||||| || || || | ||| | || Sbjct 678 GTTTCAATAGCGGCATCAATATC--ATTCATGTGTATTCCAACAGCCACTCTCATCAGCA 735 Query 72539 TATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAG 72598 | || || ||||||||||| | | | || ||| ||| ||| || || |||| | | Sbjct 736 TGTGTTGTGGTCTTTCAACAACAATATCGTTGATTCTCATCAAATACGACCTTTCAAGTG 795 Query 72599 TTTTAAAACCAAAATA 72614 |||| || |||||||| Sbjct 796 TTTTGAAGCCAAAATA 811 >seq7759 Length=1813 Score = 91.5 bits (100), Expect = 2e-13 Identities = 128/180 (71%), Gaps = 6/180 (3%) Strand=Plus/Minus Query 72761 CACTAAATAGttttt------ttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGG 72814 |||||||| |||| | | || ||||| || |||||||| || | ||||| || | Sbjct 1612 CACTAAATGGTTTGTGCTGATTAGTCTCCTTATGAAGATTTGAGACAACAATTCTTGCAG 1553 Query 72815 CTAGAATGGCATAATCTGGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCTGCCAGAG 72874 ||| || | ||||||| ||||||| || || ||| || ||||||||||| |||| | Sbjct 1552 CTAAAACGCCATAATCAGGATGTTTAGTGGTCATAGTTGCAGCTATTTCTGCAGCCAAAT 1493 Query 72875 TGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCATAGCTATTT 72934 |||| ||||| || || |||||| ||||| || | ||||| || | || |||| Sbjct 1492 TGTCTAATTCACTGGTAGTCACTCCAGGGTATATGCCATTAATAACTTTAAAAGTGATTT 1433 >seq68710 Length=718 Score = 87.8 bits (96), Expect = 2e-12 Identities = 92/121 (76%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 42087 CCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 42146 |||| ||||| || || | |||||||| || || || |||||||| ||||| | ||| | Sbjct 326 CCTCGTCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCTCTTCT 385 Query 42147 TAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGG 42206 | ||||| || || | || || || ||||| ||||||||||| || || || || |||| Sbjct 386 TCAGCCAGAAGATGGCAGCGAAGGAACCAGAGAAGAAGATTCCCTCCACAGCAGCGAAGG 445 Query 42207 C 42207 | Sbjct 446 C 446 >seq67756 Length=723 Score = 87.8 bits (96), Expect = 2e-12 Identities = 92/121 (76%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 42087 CCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 42146 |||| ||||| || || | |||||||| || || || |||||||| ||||| | ||| | Sbjct 393 CCTCGTCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCTCTTCT 334 Query 42147 TAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGG 42206 | ||||| || || | || || || ||||| ||||||||||| || || || || |||| Sbjct 333 TCAGCCAGAAGATGGCAGCGAAGGAACCAGAGAAGAAGATTCCCTCCACAGCAGCGAAGG 274 Query 42207 C 42207 | Sbjct 273 C 273 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 670559964924200