Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enteromyxum_20leei_20[genbank_20GCA_5F001455295.1_202015-12-02] 69,045 sequences; 67,975,573 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq25167 100 2e-16 >seq25167 Length=1585 Score = 100 bits (110), Expect = 2e-16 Identities = 141/195 (72%), Gaps = 5/195 (3%) Strand=Plus/Minus Query 13421 ATATAAGTATCTATCAATAAGCTATACATTTCTGAATGAATATTTTCCATCGCTATTTGG 13480 |||||||| || ||||| | ||| ||||||||||| ||||||||||| || || ||||| Sbjct 1245 ATATAAGTGTCGATCAACAGGCTGTACATTTCTGAGTGAATATTTTCAATTGCAATTTGC 1186 Query 13481 AAACCATAAAAACATCTAGCCTCTGATACCTGAACTTCGGAGTAAAATCTTTCTGCTAAG 13540 | |||||||| ||||| | || | || ||||| ||| | ||| | ||| Sbjct 1185 AGTCCATAAAAGCATCTGACTTCAGGCCATTGTACTTCACTTGCAAAACATTCAACCAAG 1126 Query 13541 TTTTCGTTAACTATCCCGTCACTAGCAGCaaaaaaaGCAAGT--ATGTGCTTAATAAAtt 13598 ||||| || || || || ||||| |||||||| || || | | ||||| | | ||| | Sbjct 1125 TTTTCATTTACAATACCATCACTGGCAGCAAAGAACGCCAATACATGTGAT--ACAAAAT 1068 Query 13599 ttttttCGT-TTTCT 13612 |||||| | ||||| Sbjct 1067 GTTTTTCTTCTTTCT 1053 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430619734371090