Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enteromyxum_20leei_20[genbank_20GCA_5F001455295.1_202015-12-02] 69,045 sequences; 67,975,573 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq50154 116 4e-21 seq33120 95.1 1e-14 >seq50154 Length=1316 Score = 116 bits (128), Expect = 4e-21 Identities = 130/174 (75%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 19330 TAAAATTAAATTAAGATCTTCTAAAATACCTGAAATAGGTGATAAGTTTGCTTCTTTTAC 19389 |||| | ||| | |||||| | | ||| | || || ||||||||||| | Sbjct 59 TAAAGTGAAAGTGAGATCTGTACGAGTTCCTCAGATTGGAGATAAGTTTGCAAGTAGACA 118 Query 19390 TGCTCAAAAAGGCACATGTGGTATGATTTATCGTCAAGAAGATATGCCTTTTACTAAAGA 19449 || |||||| || || ||||| || | |||||||| ||||| ||||| |||||| || Sbjct 119 TGGTCAAAAGGGTACTTGTGGAATTACATATCGTCAGGAAGACATGCCATTTACTGCTGA 178 Query 19450 TGGTATAGTGCCGGATCTTATTATTAACCCACATGCTTTTCCAAGTCGAATGAC 19503 ||| || || || ||| ||||||| |||||||||||| |||||||||||||||| Sbjct 179 TGGAATTGTACCTGATATTATTATCAACCCACATGCTATTCCAAGTCGAATGAC 232 >seq33120 Length=2114 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/205 (71%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 7050 ATCTATATCAGATGGATTCCAAGCAGTCATTAAAATACGTCTATCATTTGGATTTGTTTT 7109 || || | ||| ||||||||| || | | | ||| | ||| | ||||||||||| Sbjct 1428 ATTTAAACCAGGTGGATTCCATGCTGAAAGAATAATTCTCCTACTTTGAGGATTTGTTTT 1369 Query 7110 TAATTTTGTTATAA--TTATTTGTAATTGATCTATACCCTGACCTTCATAATTAGTATGA 7167 || |||||| | ||| | ||||| | ||| | |||| |||| ||| | | Sbjct 1368 TATCAAATTTATAACATGATTC--AGCTGATCAAAACCTTTTCCTTTGTAATCAGTTTTA 1311 Query 7168 CAATTTATATAATTAGCTCCAAAATGTCTCCATTGAAACCCATAAATAGGACCTAAATCA 7227 |||||| || || || |||||||||||||| ||||| ||||| | |||||| | ||| Sbjct 1310 CAATTTTCGTATTTTGCGCCAAAATGTCTCCACTGAAATCCATACACAGGACCAAGGTCA 1251 Query 7228 CCTTCTTCACGATGATTAAATCCTA 7252 ||||||||||| | || ||| |||| Sbjct 1250 CCTTCTTCACGGTCATGAAAGCCTA 1226 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595357725222000