Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enteromyxum_20leei_20[genbank_20GCA_5F001455295.1_202015-12-02] 69,045 sequences; 67,975,573 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq3928 95.1 2e-14 seq54435 93.3 9e-14 seq10934 84.2 4e-11 >seq3928 Length=3867 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||| ||||||||||||||||||||| ||||||||||||||| || || ||||||||| Sbjct 3082 AGCCTGGTTAGCTCAGTCGGTAGAGCATTAGACTCTTAATCTAAGGGCCGCGGGTTCGAG 3141 Query 142563 CCCCACATCGGG 142574 |||| ||||||| Sbjct 3142 CCCCGCATCGGG 3153 >seq54435 Length=642 Score = 93.3 bits (102), Expect = 9e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 142502 TAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGA 142561 |||||||| |||||||||||||||||| ||||||||||||| |||||||||||||| Sbjct 365 TAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGA 424 Query 142562 GCCCCACATCGGGC 142575 ||||||| | |||| Sbjct 425 GCCCCACGTTGGGC 438 >seq10934 Length=1856 Score = 84.2 bits (92), Expect = 4e-11 Identities = 64/73 (88%), Gaps = 2/73 (3%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATC-TAGTGGTCGTGGGTTCGA 142561 |||||||||||||||||||||||||| ||||||||||| ||| || || |||||||| Sbjct 191 AGCCCGGTTAGCTCAGTCGGTAGAGCATAGGACTCTTAATCCTAG-GGCCGCGGGTTCGA 133 Query 142562 GCCCCACATCGGG 142574 ||||| ||||||| Sbjct 132 GCCCCGCATCGGG 120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1026927535416845