Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enteromyxum_20leei_20[genbank_20GCA_5F001455295.1_202015-12-02] 69,045 sequences; 67,975,573 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq22640 118 1e-21 seq68710 100 3e-16 seq67756 100 3e-16 >seq22640 Length=3951 Score = 118 bits (130), Expect = 1e-21 Identities = 254/373 (68%), Gaps = 25/373 (7%) Strand=Plus/Minus Query 114278 ATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGAC 114337 || ||| |||| || |||||||| || || | || | || | ||| | |||||| || Sbjct 1581 ATGAATGCATCAGCAAGACCTTGTACGCCAATTCCTACAGGTCTATGACGCATATTTGAA 1522 Query 114338 TTTCGAGCGGTCTCCA-CGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGT 114396 ||| || ||| | ||||||| |||||| ||| || | | |||| | || || Sbjct 1521 TTTTTTGCT-TCTATAACGGGATAGAAATTCAAATCAATTATCTTATTCAAGTTCTTAAC 1463 Query 114397 GACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTC------TTC 114450 | || ||||||| ||||||||||||| | ||| ||| | ||| | ||| Sbjct 1462 TATTACTTTTGTGACCTCATGAAGCTTTTTGAAATGAAATGTTTTAGTATTATCTTTTTC 1403 Query 114451 A----TTGA-----CATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTC 114501 | |||| || |||| || || || || || || || ||||||| ||| || Sbjct 1402 AGATTTTGAATAAACAAACTTCGGCAGACATATAGAAGCTAGGTTGCACACAGCGGTTTC 1343 Query 114502 ATCCTTATCAGTGTACTCTATAATTTCCGTACACAAAT---TTGAACTCTTAATGGTGCC 114558 ||| ||||||| |||||| | |||||| |||||||||| |||| ||| || || Sbjct 1342 ATCTTTATCAGAGTACTCAACAATTTCAGTACACAAATTGCTTGA---CTTGATCACTCC 1286 Query 114559 CAAGTTCTTTTGATTTGACTTTGTG-TTACACGCATCCTTGTAAAGCATGTATGGCGTCC 114617 | || |||||||| || |||| | || || ||||| ||||||| |||||||||| | | Sbjct 1285 AACATTTTTTTGATTAGA-TTTGCGATTGCATGCATCTTTGTAAACCATGTATGGCATAC 1227 Query 114618 CCGTCTCCGTTTG 114630 | || || |||| Sbjct 1226 CAGTTTCTATTTG 1214 >seq68710 Length=718 Score = 100 bits (110), Expect = 3e-16 Identities = 102/133 (77%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 126066 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTCT 126125 ||||||| | | |||||| || || |||||| ||| || ||||| || || | ||||| Sbjct 326 CCTCGTCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCTCTTCT 385 Query 126126 TCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACACGCGAACG 126185 ||| |||||| || ||| || ||||| ||||||||||||||||||||| ||||| | Sbjct 386 TCAGCCAGAAGATGGCAGCGAAGGAACCAGAGAAGAAGATTCCCTCCACAGCAGCGAAGG 445 Query 126186 CAAAGAGACGCTC 126198 | | | |||||| Sbjct 446 CCACCACACGCTC 458 >seq67756 Length=723 Score = 100 bits (110), Expect = 3e-16 Identities = 102/133 (77%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 126066 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTCT 126125 ||||||| | | |||||| || || |||||| ||| || ||||| || || | ||||| Sbjct 393 CCTCGTCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCTCTTCT 334 Query 126126 TCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACACGCGAACG 126185 ||| |||||| || ||| || ||||| ||||||||||||||||||||| ||||| | Sbjct 333 TCAGCCAGAAGATGGCAGCGAAGGAACCAGAGAAGAAGATTCCCTCCACAGCAGCGAAGG 274 Query 126186 CAAAGAGACGCTC 126198 | | | |||||| Sbjct 273 CCACCACACGCTC 261 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596838046508600