Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enteromyxum_20leei_20[genbank_20GCA_5F001455295.1_202015-12-02] 69,045 sequences; 67,975,573 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq22640 104 2e-17 seq24282 86.0 6e-12 >seq22640 Length=3951 Score = 104 bits (114), Expect = 2e-17 Identities = 351/537 (65%), Gaps = 15/537 (3%) Strand=Plus/Minus Query 154580 ACACACAGACGCCAAGTTGCAAACGGCAATTTCTTCAGAACTACTGTATTGCACAATTTC 154639 ||| | ||| || | |||||| || || |||| || | | ||| | |||||||| Sbjct 1375 ACATATAGAAGCTAGGTTGCACACAGCGGTTTCATCTTTATCAGAGTACTCAACAATTTC 1316 Query 154640 TGCGCACAAATTACTGCATCGAATGGTGCCCAGGTTTTTCTGATTCGATTTGATGTTGCA 154699 | |||||||| || | || || | ||||| ||||| |||||| ||||| Sbjct 1315 AGTACACAAATTGCTTGACTTGATCACTCCAACATTTTTTTGATTAGATTTGCGATTGCA 1256 Query 154700 TGCGTCTTTGTACAAAATGTACGGGGTGCCCGTTTCCACTTGGGTTTCAATAATTGTG-- 154757 ||| |||||||| | ||||| || | || ||||| | ||| | ||| | ||| | Sbjct 1255 TGCATCTTTGTAAACCATGTATGGCATACCAGTTTCTATTTGAGCTTCCAAAATAGAAAA 1196 Query 154758 CGAAACAGACTTCGCGCCTCAACTTGACAAGTAAATCGATTTTCGCTCTCATATTGTTCG 154817 | | | || || ||| | || ||| || | || ||||| ||||| | | | Sbjct 1195 CCACAAAGCCTGAGCG--TTAATTTGCTTCTTATAACGTTTTTCAGATTCATACTTTGTG 1138 Query 154818 TACAGTTTTTCAAACTCTAAACTGTACACGTCCGACAAACCGGGACAGCGGTCGGGACAC 154877 || || || | ||| ||| || ||| || || || || || | | |||||| Sbjct 1137 TAAAGCTTATTAAATTCTTCACCGTAGCAATCAGATAATCCTGGTGATTCATGTGGACAC 1078 Query 154878 ATCAATGACCACATTTCGTTTTGTTGTACGCGTTTCATAAACAAATCCGGCACCCACAAA 154937 ||||| |||||| |||| || | || ||| || | |||||| |||||||| | ||| || Sbjct 1077 ATCAAAGACCACTTTTCATTATTTTTTACACGCTCCATAAATAAATCCGGTATCCATAAT 1018 Query 154938 GCGTACAACAAATCAC--GCGCCTTTTTGTCTTCAGCGCCCATGTTTCGCTTTAAATTC- 154994 || || ||||| || | |||| | | ||||| ||| ||||| | | ||||| Sbjct 1017 GCATAAAACAAGTCTCTAGCGCGTACT--TCTTCGCTGCCAGTGTTT-TTTCTCAATTCT 961 Query 154995 AAAAAATCATATATGTCGGCGTGCCACGGCTCTAAATATACGGCCATCGCGCCTTTGCG- 155053 ||||| || | ||| || | ||||||||| || | || || || | | || ||| Sbjct 960 AAAAATTCTTTTATATCTGAGTGCCACGGTTCGAGGTAAACAGCAAATGAACCAGGGCGC 901 Query 155054 --TTTTCCTCCTTGATCCACGTGAC-GCACACAATTATTGTACACGCGCAACAATGG 155107 ||||| |||||||| |||| | | || || |||||||| | |||||| || Sbjct 900 TTATTTCCACCTTGATCTACGTATCTGGAC-GTGTTGTTGTACACTCTCAACAACGG 845 >seq24282 Length=3510 Score = 86.0 bits (94), Expect = 6e-12 Identities = 104/142 (73%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 64304 CCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGC 64363 || ||| |||| | | ||||| || ||||||||||||||||| ||||| ||||| Sbjct 2 CCTGCAAAAATCAATCTTTGCTGATCTGGAGGAATTCCTTCTTTATCTTGAATTTTGCTT 61 Query 64364 TTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAA 64423 ||||||| ||| | | ||| | || || || | ||||| ||||||||| || | Sbjct 62 TTTACAATCTCAATGGCATCGTTAGGTTCAACATCAAGAGTTATGGTCTTGCCAGTAAGT 121 Query 64424 GTTTTTACGAAAATTTGCATTT 64445 ||||| ||||| || ||||||| Sbjct 122 GTTTTGACGAATATCTGCATTT 143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499213575309800