Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enteromyxum_20leei_20[genbank_20GCA_5F001455295.1_202015-12-02] 69,045 sequences; 67,975,573 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq22640 109 7e-19 seq68710 96.9 4e-15 seq67756 96.9 4e-15 >seq22640 Length=3951 Score = 109 bits (120), Expect = 7e-19 Identities = 252/373 (68%), Gaps = 25/373 (7%) Strand=Plus/Minus Query 116239 ATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGAC 116298 || ||| |||| || |||||||| || || | || | || | ||| | |||||| || Sbjct 1581 ATGAATGCATCAGCAAGACCTTGTACGCCAATTCCTACAGGTCTATGACGCATATTTGAA 1522 Query 116299 TTTCGAGCGGTCTCCA-CGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGT 116357 ||| || ||| | ||||||| |||||| ||| || | | |||| | || || Sbjct 1521 TTTTTTGCT-TCTATAACGGGATAGAAATTCAAATCAATTATCTTATTCAAGTTCTTAAC 1463 Query 116358 GACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTC------TTC 116411 | || ||||||| ||||||||||||| | ||| ||| | ||| | ||| Sbjct 1462 TATTACTTTTGTGACCTCATGAAGCTTTTTGAAATGAAATGTTTTAGTATTATCTTTTTC 1403 Query 116412 A----TTGA-----CATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTC 116462 | |||| || |||| || || || || || || || ||||||| ||| || Sbjct 1402 AGATTTTGAATAAACAAACTTCGGCAGACATATAGAAGCTAGGTTGCACACAGCGGTTTC 1343 Query 116463 ATCCTTATCAGTGTACTCTATAATTTCCGTACACAAAT---TTGAACTCTTAATGGTGCC 116519 ||| ||||||| |||||| | |||||| |||||||||| |||| ||| || || Sbjct 1342 ATCTTTATCAGAGTACTCAACAATTTCAGTACACAAATTGCTTGA---CTTGATCACTCC 1286 Query 116520 CAAGTTCTTTTGATTTGACTTTGTG-TTACACGCATCCTTGTAGAGCATATATGGCGTCC 116578 | || |||||||| || |||| | || || ||||| ||||| | ||| |||||| | | Sbjct 1285 AACATTTTTTTGATTAGA-TTTGCGATTGCATGCATCTTTGTAAACCATGTATGGCATAC 1227 Query 116579 CCGTCTCCGTTTG 116591 | || || |||| Sbjct 1226 CAGTTTCTATTTG 1214 >seq68710 Length=718 Score = 96.9 bits (106), Expect = 4e-15 Identities = 101/133 (76%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 127539 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCT 127598 ||||||| | | |||||| || || |||||| ||| || ||||| || || | ||||| Sbjct 326 CCTCGTCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCTCTTCT 385 Query 127599 TCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAACG 127658 ||| |||||| || ||| || || |||||||||||||| ||||||||| ||||| | Sbjct 386 TCAGCCAGAAGATGGCAGCGAAGGAACCAGAGAAGAAGATTCCCTCCACAGCAGCGAAGG 445 Query 127659 CAAATAGACGCTC 127671 | | | |||||| Sbjct 446 CCACCACACGCTC 458 >seq67756 Length=723 Score = 96.9 bits (106), Expect = 4e-15 Identities = 101/133 (76%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 127539 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCT 127598 ||||||| | | |||||| || || |||||| ||| || ||||| || || | ||||| Sbjct 393 CCTCGTCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCTCTTCT 334 Query 127599 TCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAACG 127658 ||| |||||| || ||| || || |||||||||||||| ||||||||| ||||| | Sbjct 333 TCAGCCAGAAGATGGCAGCGAAGGAACCAGAGAAGAAGATTCCCTCCACAGCAGCGAAGG 274 Query 127659 CAAATAGACGCTC 127671 | | | |||||| Sbjct 273 CCACCACACGCTC 261 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 612977704942200