Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enteromyxum_20leei_20[genbank_20GCA_5F001455295.1_202015-12-02] 69,045 sequences; 67,975,573 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq68710 91.5 2e-13 seq67756 91.5 2e-13 seq61178 86.0 8e-12 >seq68710 Length=718 Score = 91.5 bits (100), Expect = 2e-13 Identities = 86/110 (78%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 102203 TGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGG 102262 ||| ||||| ||||||||||||||||||||| || || | ||||| |||||| |||| Sbjct 435 TGTGGAGGGAATCTTCTTCTCTGGTTCCTTCGCTGCCATCTTCTGGCTGAAGAAGAGAGG 376 Query 102263 TCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGG 102312 || ||||| || || ||||||||||||||| ||| | ||||||| Sbjct 375 CCTGATGCCCGGCCTGACCTTCTCCAACGAGCTCATCAGCAGAGACGAGG 326 >seq67756 Length=723 Score = 91.5 bits (100), Expect = 2e-13 Identities = 86/110 (78%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 102203 TGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGG 102262 ||| ||||| ||||||||||||||||||||| || || | ||||| |||||| |||| Sbjct 284 TGTGGAGGGAATCTTCTTCTCTGGTTCCTTCGCTGCCATCTTCTGGCTGAAGAAGAGAGG 343 Query 102263 TCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGG 102312 || ||||| || || ||||||||||||||| ||| | ||||||| Sbjct 344 CCTGATGCCCGGCCTGACCTTCTCCAACGAGCTCATCAGCAGAGACGAGG 393 >seq61178 Length=12939 Score = 86.0 bits (94), Expect = 8e-12 Identities = 126/176 (72%), Gaps = 2/176 (1%) Strand=Plus/Minus Query 176912 TTCCCACGAAGAGGGAAGACACCGTAGTGATCGCGACCAACCACAGAGAGACCCGCAACC 176971 || || | |||||| || |||||||| | ||| | |||| | | |||||| ||||| Sbjct 8048 TTACCTCTAAGAGGAAATACACCGTAATAATCTCTCCCAATGATACTGAGACCAGCAACA 7989 Query 176972 GCGAGCGTTTTCGCAGAATCACCCTCTGTCACGATGAGTGTACACTTGCCAGATTGTGCC 177031 || | | ||| || ||||| ||||| |||| || || || || ||| ||| Sbjct 7988 GCTAATGATTTAGCTGAATCTCCCTCCGTCAGTATAAGAACGCATTTAGATGATAATGCT 7929 Query 177032 GTACCCGCCTTGTTCGCATCATCCAATTTGGGAATACCAG-TAATTTTGGACTTTC 177086 | || || ||||| |||||||||||||| |||||||||| ||| || ||||||| Sbjct 7928 GAGCCGGCTTTGTTAGCATCATCCAATTTCGGAATACCAGATAACATT-GACTTTC 7874 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620206660512400