Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enteromyxum_20leei_20[genbank_20GCA_5F001455295.1_202015-12-02] 69,045 sequences; 67,975,573 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq22640 132 2e-26 seq59245 129 3e-25 >seq22640 Length=3951 Score = 132 bits (146), Expect = 2e-26 Identities = 172/234 (74%), Gaps = 3/234 (1%) Strand=Plus/Minus Query 25930 CTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTC 25989 ||||||||||||||| || ||||| | ||||||||| || ||||| || | | |||||| Sbjct 1045 CTCCATAAATAAATCCGGTATCCATAATGCATAAAACAAGTCTCTAGCGCGTACTTCTTC 986 Query 25990 TTTTCC-GTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTA 26048 | || ||| || ||| | | ||||| || || |||||||||||||| ||||| | Sbjct 985 GCTGCCAGTGTTT-TTTCTCAATTCTAAAAATTCTTTTATATCTGAGTGCCACGGTTCGA 927 Query 26049 AATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTT 26108 || | |||||| ||| | || ||||||||||||||||||||| | || | Sbjct 926 GGTAAACAGCAAATGAACCAGGGCGCTTATTTCCACCTTGATCTACGTATCTGGACGTGT 867 Query 26109 CATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTAT 26162 ||| | ||| |||||| |||||||||||| |||| | ||| || || |||| Sbjct 866 TGTTGTACACTCTCAACAACGGAACTAATCCATTTGATATTCCATTAGT-CTAT 814 >seq59245 Length=1049 Score = 129 bits (142), Expect = 3e-25 Identities = 169/233 (73%), Gaps = 1/233 (0%) Strand=Plus/Plus Query 25930 CTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTC 25989 |||||||||||| || || ||||| | ||||||||| || ||||| || | | |||||| Sbjct 5 CTCCATAAATAAGTCAGGTATCCATAATGCATAAAACAAGTCTCTAGCGCGTACTTCTTC 64 Query 25990 TTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAA 26049 | ||| || ||| | | ||||| || || |||||||||||||| ||||| | Sbjct 65 GCTGCCGGTGTTTTTTCTCAATTCTAAAAATTCTTTTATATCTGAGTGCCACGGTTCGAG 124 Query 26050 ATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTC 26109 || | |||||| ||| | || ||||||||||||||||||||| | || | Sbjct 125 GTAAACAGCAAATGAACCAGGGCGCTTATTTCCACCTTGATCTACGTATCTGGACGTGTT 184 Query 26110 ATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTAT 26162 ||| | ||| |||||| |||||||||||| |||| | ||| || || |||| Sbjct 185 GTTGTACACTCTCAACAACGGAACTAATCCATTTGATATTCCATTAGT-CTAT 236 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 252827070398375