Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enteromyxum_20leei_20[genbank_20GCA_5F001455295.1_202015-12-02] 69,045 sequences; 67,975,573 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq16394 98.7 1e-15 seq25167 87.8 3e-12 seq24282 87.8 3e-12 >seq16394 Length=525 Score = 98.7 bits (108), Expect = 1e-15 Identities = 99/129 (77%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 155921 AGAAGGCATACCTCCAGAACAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATAC 155980 |||||| || |||||||| || ||||||||||||| ||| ||||| || ||||||||| Sbjct 525 AGAAGGAATTCCTCCAGATCAGCAAAGATTGATTTTTGCAGGTAAACAACTCGAAGATGG 466 Query 155981 CAGAACTTTATCAGATTATAATATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATT 156040 || |||||| | || || || || ||||| | || || ||||| ||||| ||||| Sbjct 465 TAGGACTTTAACTGACTACAACATCCAGAAAGAATCAACCCTACATTTGGTGTTGAGATT 406 Query 156041 AAGAGGCGG 156049 ||||| || Sbjct 405 GAGAGGAGG 397 >seq25167 Length=1585 Score = 87.8 bits (96), Expect = 3e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 18407 TCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGAATACATTTCAGAATGT 18466 ||| ||||| | |||||| |||||||||||||| |||| |||||||| || || Sbjct 1266 TCTCTTTCTAATGGATCTTTGATATAAGTGTCGATCAACAGGCTGTACATTTCTGAGTGA 1207 Query 18467 ATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTCGGGATATTGAATCTCG 18526 || |||| || || || || | | |||||| |||| | || || |||| | || Sbjct 1206 ATATTTTCAATTGCAATTTGCAGTCCATAAAAGCATCTGACTTCAGGCCATTGTACTTCA 1147 Query 18527 CTATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAGCAGATGCGAAAAATGCC 18586 || ||| | ||| ||||| || ||||| || ||||| ||| | || || || ||| Sbjct 1146 CTTGCAAAACATTCAACCAAGTTTTCATTTACAATACCATCACTGGCAGCAAAGAACGCC 1087 Query 18587 AAAACATATTTAATGAAATGTTTTTC 18612 || |||| | | ||||||||||| Sbjct 1086 AATACATGTGATACAAAATGTTTTTC 1061 >seq24282 Length=3510 Score = 87.8 bits (96), Expect = 3e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 155821 AAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATT 155880 ||||||| ||||| | |||||| | ||||| || || || || | || || ||| | Sbjct 143 AAATGCAGATATTCGTCAAAACACTTACTGGCAAGACCATAACTCTTGATGTTGAACCTA 84 Query 155881 CTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAAC 155940 ||| ||| | || |||| ||||| |||||||||||||| || |||||||| | Sbjct 83 ACGATGCCATTGAGATTGTAAAAAGCAAAATTCAAGATAAAGAAGGAATTCCTCCAGATC 24 Query 155941 AACAAAGATTGATTTATGCCGGT 155963 | ||||||||||||| ||| ||| Sbjct 23 AGCAAAGATTGATTTTTGCAGGT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731240348722000