Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enteromyxum_20leei_20[genbank_20GCA_5F001455295.1_202015-12-02] 69,045 sequences; 67,975,573 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq56043 95.1 4e-14 seq53362 95.1 4e-14 seq33120 87.8 5e-12 seq22640 86.0 2e-11 seq50154 84.2 6e-11 seq25167 84.2 6e-11 >seq56043 Length=3862 Score = 95.1 bits (104), Expect = 4e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 289088 CAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAG 289147 |||||| || | | | ||| | ||| |||| |||||| ||||||| |||||| ||| Sbjct 3313 CAAATAGTTTTTTGATACGAGCTGCACCAACCCCAACAAACATTTCGTCAAATTGAGATC 3372 Query 289148 CGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCT 289207 | | ||| | | |||| ||| |||||| ||||| || || || |||||||| || | Sbjct 3373 CAGTTACGTAATAAAATGGTACTCCTGCTTCTCCTGCCACAGCTCTTGCCAGAAGCGTTT 3432 Query 289208 TACCTGTTCCAGGTGGTCCC 289227 |||||||||||||||| ||| Sbjct 3433 TACCTGTTCCAGGTGGCCCC 3452 >seq53362 Length=2305 Score = 95.1 bits (104), Expect = 4e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 289088 CAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAG 289147 |||||| || | | | ||| | ||| |||| |||||| ||||||| |||||| ||| Sbjct 1756 CAAATAGTTTTTTGATACGAGCTGCACCAACCCCAACAAACATTTCGTCAAATTGAGATC 1815 Query 289148 CGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCT 289207 | | ||| | | |||| ||| |||||| ||||| || || || |||||||| || | Sbjct 1816 CAGTTACGTAATAAAATGGTACTCCTGCTTCTCCTGCCACAGCTCTTGCCAGAAGCGTTT 1875 Query 289208 TACCTGTTCCAGGTGGTCCC 289227 |||||||||||||||| ||| Sbjct 1876 TACCTGTTCCAGGTGGCCCC 1895 >seq33120 Length=2114 Score = 87.8 bits (96), Expect = 5e-12 Identities = 105/142 (74%), Gaps = 3/142 (2%) Strand=Plus/Plus Query 381028 GAAGAAGATGACCTTGGTCCTATTTACGGATTTCAGTGGAGACATTTTAACGCCGATTAT 381087 ||||||| ||||||||||||| | || ||||||||||||||||||||| ||| | || Sbjct 1243 GAAGAAGGTGACCTTGGTCCTGTGTATGGATTTCAGTGGAGACATTTTGGCGCAAAATAC 1302 Query 381088 GATAATTGTGATAGTGATTATACTGGTAAGGGTGTCGACCAGTTAAAATATATCATAGAC 381147 || |||||| | | |||||| | || || ||| | || ||| | || || | ||| | Sbjct 1303 GAAAATTGTAAAACTGATTACAAAGGAAAAGGTTTTGATCAGCTGAATCATGTTATAAAT 1362 Query 381148 CAGCTAAA---AAATCCTGAAA 381166 | |||| ||||||| ||| Sbjct 1363 TTGATAAAAACAAATCCTCAAA 1384 >seq22640 Length=3951 Score = 86.0 bits (94), Expect = 2e-11 Identities = 170/252 (67%), Gaps = 0/252 (0%) Strand=Plus/Minus Query 155678 ATTCTTCTGGTTAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGT 155737 ||| || || |||||||| | || || ||||| ||||| | |||||||| | || || Sbjct 1282 ATTTTTTTGATTAGATTTGCGATTGCATGCATCTTTGTAAACCATGTATGGCATACCAGT 1223 Query 155738 CTCCATCTGTGCGTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTA 155797 || || || || |||| ||| | ||| | | | || ||||||||||| || || Sbjct 1222 TTCTATTTGAGCTTCCAAAATAGAAAACCACAAAGCCTGAGCGTTAATTTGCTTCTTATA 1163 Query 155798 TCTGCCTTCCGACTCATATTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACT 155857 | ||| || ||||| || | || ||| | | || |||||||| |||||| Sbjct 1162 ACGTTTTTCAGATTCATACTTTGTGTAAAGCTTATTAAATTCTTCACCGTAGCAATCAGA 1103 Query 155858 CAGTCCAGGGCACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTC 155917 | ||| || | | || || || | || ||||| ||| |||| |||||||||| Sbjct 1102 TAATCCTGGTGATTCATGTGGACACATCAAAGACCACTTTTCATTATTTTTTACACGCTC 1043 Query 155918 CATAAATACATC 155929 |||||||| ||| Sbjct 1042 CATAAATAAATC 1031 >seq50154 Length=1316 Score = 84.2 bits (92), Expect = 6e-11 Identities = 108/146 (74%), Gaps = 6/146 (4%) Strand=Plus/Minus Query 251845 ATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGTCCATCA 251904 |||||||| ||||| ||||||||||| || ||||| || || || ||| | ||||||| Sbjct 235 ATAGTCATTCGACTTGGAATAGCATGTGGGTTGATAATAATATCAGGTACAATTCCATCA 176 Query 251905 GCAGTGAAGGGCATATCCTTTTCCTCAATA-ATGT--TTCCAATAGTTCCCTTTTGTCCG 251961 ||||| || ||||| || ||||| | | |||| ||||| ||| |||||||| || Sbjct 175 GCAGTAAATGGCATGTC---TTCCTGACGATATGTAATTCCACAAGTACCCTTTTGACCA 119 Query 251962 TGACGAGAACTGAACTTATCACCAAT 251987 || | | |||||||| ||||| Sbjct 118 TGTCTACTTGCAAACTTATCTCCAAT 93 >seq25167 Length=1585 Score = 84.2 bits (92), Expect = 6e-11 Identities = 116/157 (74%), Gaps = 4/157 (3%) Strand=Plus/Plus Query 133202 GATGAAAAACATTTTATTTC-TATGATTTTAGCGTTTTTTGCTGCGAGTGATGGTATTGT 133260 || |||||||||||| | || ||| | || ||||| |||||||| |||||||||||||| Sbjct 1058 GAAGAAAAACATTTTGTATCACATG-TATTGGCGTTCTTTGCTGCCAGTGATGGTATTGT 1116 Query 133261 TCTTGAAAATTTAGGAACACGGTTTATGGGAGAAGTTCAACTGGCC-GAAGCCCGTGCCT 133319 |||||| || | | | ||| | ||||| ||| ||||| |||| | | || Sbjct 1117 AAATGAAAACTTGGTTGAATGTTTTGCAAGTGAAGTACAA-TGGCCTGAAGTCAGATGCT 1175 Query 133320 TTTATGGGCTACAGATTGCGATGGAAAATATCCATTC 133356 ||||||| || || ||||| || |||||||| || || Sbjct 1176 TTTATGGACTGCAAATTGCAATTGAAAATATTCACTC 1212 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1470515572658165