Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enteromyxum_20leei_20[genbank_20GCA_5F001455295.1_202015-12-02] 69,045 sequences; 67,975,573 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq22640 109 5e-19 >seq22640 Length=3951 Score = 109 bits (120), Expect = 5e-19 Identities = 484/759 (64%), Gaps = 18/759 (2%) Strand=Plus/Minus Query 138492 CAGATATCTGTTTATGACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTT 138551 || ||| |||| | | ||||||||| || | || || || ||| ||||| || | Sbjct 1966 CAAATACTTGTTCACAATCTGAAATTCCCCAGATAAAACACGTCGATTATAAATATTTGT 1907 Query 138552 GGTGAAAGGCTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCAT 138611 || |||| |||| |||||||||||||||| || |||| ||| | ||| || ||||| Sbjct 1906 TGTATAAGGTTCAATAGATTCGTTGTTTCCCATTATTTGAGACGTTGACGCCGTAGGCAT 1847 Query 138612 GTACGCCACCAAAAGAGAATTCCGTAAACCGTGAAGCTTGATTCGTTCCTTGAGCGACGA 138671 || | |||||| ||| | | ||| || ||||||| | || | || Sbjct 1846 TGGTGCAATTAAAAGACTATTTCTAACACCATGTTCCTTGATTTTAGCTTTCAATGATTT 1787 Query 138672 CCAGTCCCACAAATCGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCC--AAA 138729 ||| ||||| ||||| |||| | | |||||||| || || ||||| || || | | Sbjct 1786 CCAATCCCATAAATCAGTAGGAGTAATATTCCACATGTCATATTGTAAGATACCTTGAGA 1727 Query 138730 CTTGCGGGACTGCCTTCGTACGAATCGTATACACCAAACTCTTGCGCCAACTCGTTGCTC 138789 || | || | ||| ||| | |||||| ||| |||| || || Sbjct 1726 TATGGGTGAAT--CTTTGTAAGTGGAGTATACGCCATGTTCTTTTGCTTCTTCACATGAA 1669 Query 138790 GCCTCGAGCGCACCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCG 138849 | ||| || || ||| || || ||||| || | ||| | | | ||| || Sbjct 1668 GACTCAAGTGCGGCATGATATATTGTTTCAAATATTTCAATATTCAACTTCCTGGCTTCT 1609 Query 138850 GCGCTCTCGTACGGCATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACT 138909 ||||| ||| | ||||| | || | |||| || || || || ||||| ||||| | | Sbjct 1608 GCGCTATCGAATGGCATTCTAAGTTTGATGAATGCATCAGCAAGACCTTGTACGCCAATT 1549 Query 138910 CCGACAGGGCGATGGCGCAGATTTGACGCTTTTGCGGCTTCGATA---GGATAATAGTTT 138966 || ||||| | ||| |||| |||||| |||||| ||| ||| ||||| | || Sbjct 1548 CCTACAGGTCTATGACGCATATTTGAATTTTTTGC---TTCTATAACGGGATAGAAATTC 1492 Query 138967 ACATCGATGATTTTGTTTAAATTTCGCACGACCACCTTAGTCGTATGCTTTAATCGTTCA 139026 | ||| || || || || || || || | || || || | | | || | || Sbjct 1491 AAATCAATTATCTTATTCAAGTTCTTAACTATTACTTTTGTGACCT-CATGAAGCTTTTT 1433 Query 139027 -AAATCGTATGTGCCCCCGTTGTCGTCGAC-GACGTCGA-----CAAATTTGTTGACACA 139079 |||| |||| || || | | || | || |||| || | ||| Sbjct 1432 GAAATGAAATGTTTTAGTATTATCTTTTTCAGATTTTGAATAAACAAACTTCGGCAGACA 1373 Query 139080 AATCGAGGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGC 139139 || || |||| ||||||||| || ||| || || ||| || |||||||| | Sbjct 1372 TATAGAAGCTAGGTTGCACACAGCGGTTTCATCTTTATCAGAGTACTCAACAATTTCAGT 1313 Query 139140 ACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGC 139199 ||||||||| || |||||||| || | ||||| |||||| ||| || || || || Sbjct 1312 ACACAAATTGCTTGACTTGATCACTCCAACATTTTTTTGATTAGATTTGCGATTGCATGC 1253 Query 139200 ATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTG 139238 ||||||||||| ||| || || | |||||||| | ||| Sbjct 1252 ATCTTTGTAAACCATGTATGGCATACCAGTTTCTATTTG 1214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449509310252600