Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enteromyxum_20leei_20[genbank_20GCA_5F001455295.1_202015-12-02] 69,045 sequences; 67,975,573 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq24282 104 2e-17 seq16394 102 6e-17 >seq24282 Length=3510 Score = 104 bits (114), Expect = 2e-17 Identities = 108/142 (76%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 29647 CCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGT 29706 || ||| | ||||||||||||||||| || ||||| || ||||| ||||| | ||| | Sbjct 2 CCTGCAAAAATCAATCTTTGCTGATCTGGAGGAATTCCTTCTTTATCTTGAATTTTGCTT 61 Query 29707 TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAG 29766 || ||| | || | | || | |||| || ||||||||||| || |||||||| | Sbjct 62 TTTACAATCTCAATGGCATCGTTAGGTTCAACATCAAGAGTTATGGTCTTGCCAGTAAGT 121 Query 29767 GTTTTAACAAATATCTGCATTT 29788 ||||| || ||||||||||||| Sbjct 122 GTTTTGACGAATATCTGCATTT 143 >seq16394 Length=525 Score = 102 bits (112), Expect = 6e-17 Identities = 100/129 (78%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| ||||| | || ||||||||| || || |||||||| || ||||| || || | Sbjct 397 CCTCCTCTCAATCTCAACACCAAATGTAGGGTTGATTCTTTCTGGATGTTGTAGTCAGTT 456 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | | ||| ||||||||||| || ||| | ||||||||||||||||| || ||| Sbjct 457 AAAGTCCTACCATCTTCGAGTTGTTTACCTGCAAAAATCAATCTTTGCTGATCTGGAGGA 516 Query 29680 ATACCCTCT 29688 || || ||| Sbjct 517 ATTCCTTCT 525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 384895043460345