Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enteromyxum_20leei_20[genbank_20GCA_5F001455295.1_202015-12-02] 69,045 sequences; 67,975,573 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq50154 102 1e-16 >seq50154 Length=1316 Score = 102 bits (112), Expect = 1e-16 Identities = 202/289 (70%), Gaps = 20/289 (7%) Strand=Plus/Plus Query 193764 GGGTTTACTGGTAAAAGAATTGAAAATAAAATTTTTATAGGGCCAACTTATTATCATCGT 193823 || |||||||| | || ||| | | | ||||||| || || || |||||||| | Sbjct 393 GGATTTACTGGAAGAAAAATGAATGCTCAGGTTTTTATTGGACCCACCTATTATCAAAGG 452 Query 193824 CTTAAACATATGGTTAAGGATAAAATGCA------TGCTAGAAGTCATGGACAAGTGACT 193877 | |||||||||||| |||||||||| || || ||| ||| | |||| || Sbjct 453 TTAAAACATATGGTTGAGGATAAAATTCACAGCAGAGCGAGAGGTCCTCTTCAAG-GA-- 509 Query 193878 ACTTTACATCGACAACCAAATTGTGGTCGTTCTCAAGGTGGAGGTTTAAGATTTGGAGAA 193937 || ||| |||||||| | || |||||| | ||| ||||| |||||||||||| Sbjct 510 --TTGACA-CGACAACCTATGGAAGGACGTTCTAGGGATGGTGGTTTGAGATTTGGAGAA 566 Query 193938 ATGGAGAAAGACTGTATTTTAGTTCATGGTGCTAC-TCAATTCTTGAATGAAAGAATGTT 193996 ||||||| ||| ||| | | ||||||||| | || ||||| ||||||||| || Sbjct 567 ATGGAGAGAGATTGTCAGCTTGCACATGGTGCTGCGTCCTTTCTT-AATGAAAGA--CTT 623 Query 193997 TTTGTA--TTCTGATCCTTTTCAAGTCGATGTTTG-CACAGAATGTGGT 194042 |||| | |||||| ||| || | ||||||| ||| |||||||| Sbjct 624 TTTGGAGCATCTGATGCTTACGAAATTTATGTTTGTGACA-AATGTGGT 671 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 634629402032600