Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enteromyxum_20leei_20[genbank_20GCA_5F001455295.1_202015-12-02] 69,045 sequences; 67,975,573 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq903 488 4e-132 seq30734 181 8e-40 seq61178 136 3e-26 seq46752 111 1e-18 seq5965 95.1 9e-14 >seq903 Length=2728 Score = 488 bits (540), Expect = 4e-132 Identities = 1040/1534 (68%), Gaps = 38/1534 (2%) Strand=Plus/Plus Query 281366 AATCTTCCGCGATTATTAGTAATAGTAATATTCTTGGATTTGTTT---GTTGATTTATCA 281422 ||||| || || ||| ||||||||||| ||||| |||| || |||||||||||| Sbjct 507 AATCTACCTTTATCATTGGTAATAGTAATTTTCTT---TTTGGTTCCAGTTGATTTATCA 563 Query 281423 GCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGG 281482 | ||| ||||||||||||||||| ||||| | |||||| |||||||||||||| || Sbjct 564 ACAGCATCGACATTAAGAATACCATTAGCATCAATATCAAAGGTGACTTCAATTTGGGGA 623 Query 281483 ACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCT 281542 || ||||| | || || || || || | | ||| |||| ||| || |||||| Sbjct 624 ACACCTCTTGGGGCTGGAGGAATACCAGTAAGTTCGAATTTTCCAAGAAGATGGTTATCT 683 Query 281543 TTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAA 281602 || || | || |||||| ||||| | ||| || | |||| | | |||||||| || Sbjct 684 TTGGTCATAGATCTTTCACCTTCGAACACTTGAATGGCAACTCCTGGCTGATTATCAGAG 743 Query 281603 TAAGTTGTAAATACTCTGGATTT-TTTACAAGGAATTGTTGTGTTTCTATCAATAATATT 281661 || |||| | | | ||||| ||| |||| ||||| || |||||||| | ||||| | | Sbjct 744 TATGTTG-AGAAAATCTGGGTTTGTTTAGTTGGAATAGTAGTGTTTCTTTTAATAAGAGT 802 Query 281662 GGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGAC 281721 ||||| | ||||||||| ||||| | ||||||||| | |||| ||||| | | | Sbjct 803 AGTCATCACACCACCAGCGGTTTCAATACCAAGAGACAATGGAGCAACATCCAACAACAG 862 Query 281722 AATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACC 281781 || | || || || || || | |||||| | |||||| ||||||| ||||||||| Sbjct 863 AACGTCTTTAATATTATCTGAGGTATTACCAACCAAAATAGCAGCTTGAACAGCAGCACC 922 Query 281782 ATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATT 281841 || |||||||||||||||||||| | || || | || || || | |||||| | Sbjct 923 GTAGGCAACAGCTTCATCAGGATTGATAGATTTGCACAATTCCTTTCCGTGGAAAAAGTC 982 Query 281842 TGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATG 281901 | |||||| | |||||||||||||| | || || |||||||| |||| ||| | Sbjct 983 TTGAAGAAGACCTTGAACCTTAGGAATACGTGTAGAACCACCAACTAAAACAACTTCGT- 1041 Query 281902 CACCTGTGATTTATCCAGTTTTGAATCCAATA------AAAC-TTTTTCAACGGGTTCAA 281954 |||||| || | ||| ||| || || | ||||||||| || | | Sbjct 1042 ------TGATTTGACCTTTGCTGAGACCACTATCTTTTAAGCATTTTTCAACAGGAACCA 1095 Query 281955 GACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT 282014 | ||| || | ||||| || | |||||| ||||| ||||| | | | || || Sbjct 1096 TAGTGCTTCTGAAAAGATCTGAGCAGATTTCTTCAAATTTTGCTCTTGAGATACTGGTAT 1155 Query 282015 TATAATCAATTCCTTCGAACAA-AGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGAT 282073 ||||||||| || || ||||| |||||||| ||||| | | ||| |||||| Sbjct 1156 AATAATCAATACCATC-AACAAGAGAATCAAGCTCAATACTGGCAGAAGTGCTAGAAGAC 1214 Query 282074 AGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTA-AG-GCTTTTGCTGATT 282131 | | | |||||| | ||| || || || | | || | || |||||| | || Sbjct 1215 AAAGTTCTTTTAGCTCTTTCGCAACAAGTTCTCAAACGACGAAGAGCTCTTTTGTT--TT 1272 Query 282132 GATTCAAATCTGTTTTATATTTTCTCTTGAAATC-TTCAACACACCATGTTACAAGACGA 282190 | | | |||| |||| | |||||| || || || | | | | | | || | | Sbjct 1273 CAGTGATATCTTTTTTGTGTTTTCTTTTAAATTCAGTGATGAAATGGT-TGACCATTCTG 1331 Query 282191 TTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT 282250 || |||||||||||||| ||||| | ||||| || |||||| | |||| |||| Sbjct 1332 TTGTCAAAATCTTCACCACCCAAATGAGTATCACCACCGGTAGCTTTAACTTCAAAAACG 1391 Query 282251 CCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGT 282310 ||||| |||| | || | |||||| ||| |||||||| | ||| |||||||| Sbjct 1392 CCATCATCAATGCTAAGAATGGACACATCAAAGGTACCACCACCAAGATCGAAAATAAGA 1451 Query 282311 ACATTCATTTCTTTGTC-TTGG--TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTT 282367 | || || || | | |||| ||||| || | ||||| |||| ||||||||||| Sbjct 1452 ATGTTAATCTC---GCCATTGGTTTTTTTGTCTAATCCATAAGCAATGGCAGCAGCAGTA 1508 Query 282368 GGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCT 282427 || || ||||| || | | ||||| | |||||||| || |||||||| || ||| Sbjct 1509 GGCTCGTTAATGATACGGAGTACATTTAATCCAGCAATAAGACCAGCATCTTTTGTTGCT 1568 Query 282428 TGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCT-TT 282486 || | ||||| || || ||||| ||||| ||||| || |||||| ||| | | | Sbjct 1569 TGACGCTGTGAGTCATTGAAATAAGCAGGGCATGTAATTACAGCATCT-TTAATGGTAGT 1627 Query 282487 TCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTC 282546 ||||| || | || | |||||||| | || | |||||| ||||||| ||| Sbjct 1628 TCCAAGGTATGACTCAGCACACTCCTTCATTTTTATCAACACCATTGAAGAAATTTCTTC 1687 Query 282547 TGGAGAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAAC 282606 |||| | | ||| ||| || |||| || ||| | || || || | | Sbjct 1688 AGGAGTAAAAACTTTGTTTTCTCCTTTGTATGTAACGGCAATCTTAGGCTTGGTATCTTC 1747 Query 282607 ATTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATC 282666 || | ||| |||||||| | || | ||| ||||||| ||||| | | Sbjct 1748 GTTTACAACGCGGAATGGCCAGTGCTTAAGATCACTTTGAACAGAGGAATCATTGTACTT 1807 Query 282667 TCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATA 282726 ||| ||||| |||| ||| || ||||||||||| ||| | ||||| |||||||||| Sbjct 1808 TCTTCCAATCAATCTTTTGGCGTCAAAAATAGTGTTGTCAGCATTAAGAGCAGCTTGATT 1867 Query 282727 TTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGT 282786 || || ||||| || | || |||||| || | || | ||||| ||||| || Sbjct 1868 CTTTGCGGCATCACCCAACAATCTTTCTGTATCATTGAAAGCGACATAACTGGGAGTAGT 1927 Query 282787 GCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACA 282846 | ||||||||||| || || || || ||||| || |||| ||| | || || ||||| Sbjct 1928 TCTGTTACCTTGATCGTTTGCTATGATCTCAACCTTTCCATGTTGAAAAACTCCAACACA 1987 Query 282847 ACTAAAAGTTGTTCCTAAATCAATACCAATAGCA 282880 | | || ||||| ||||| ||||| | |||| Sbjct 1988 AGAGTATGTAGTTCCCAAATCTATACCGACAGCA 2021 >seq30734 Length=2973 Score = 181 bits (200), Expect = 8e-40 Identities = 702/1083 (65%), Gaps = 39/1083 (4%) Strand=Plus/Plus Query 281408 TTTGTTGATTTATCAGCGGCAGTCAC-ATTAAGAATACCATTGGCATCCAAATCAAATGT 281466 |||| ||| || |||| ||| | || | |||| |||||| | | | ||||| || Sbjct 1248 TTTGATGACTTCTCAGAAGCACTAACTAACAAGA-TACCATCGTTGTTGTATTCAAAAGT 1306 Query 281467 GACTTCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCC 281526 ||||||||||||||| || ||||| | |||| || || | || || | | Sbjct 1307 GACTTCAATTTGAGGAACACCTCTTGGTGCAGCCTTAATACCAGTAAGTTTGAAACTATC 1366 Query 281527 CAGATTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTAC 281586 || | || |||||||||| | || ||||| || || | || || ||| | Sbjct 1367 CAAAAGATGGTTATCTTTAGCCATGCCACGCTCACCTTCCAAGACTTTAATTTCCACTTC 1426 Query 281587 AGTTTGATTATCTGAATAAGTTGTAAATACTCTGGATTTTTTACAAGGA-ATTGTTGTGT 281645 ||||| ||| | | |||||| || | |||| |||||| | || ||| | |||| Sbjct 1427 TGTTTGGCTATTTTGAACAGTTGTGAA-AGTCTGAGTTTTTTTGACGGGGATTCTAGTGT 1485 Query 281646 TTCTATCAATAATATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAG 281705 |||| || ||| |||||||| | |||||| ||||| | ||||||| |||||||| Sbjct 1486 TTCTGGGAACAATTTTGGTCATTACACCACCTTGGGTTTCAATTCCAAGAGTAAGAGGAG 1545 Query 281706 TGACATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTG 281765 ||||||||| | || | || |||| || | | || |||| ||||||| | Sbjct 1546 TGACATCAAGCAAAACCAAATGA-GAAGCTTCT--TTAGC---ACCAGAAAGAATACCGC 1599 Query 281766 CTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTT 281825 |||||| ||| |||||||| || |||||||||||||||| || | | ||| ||| || Sbjct 1600 CTTGAACAGCTGCACCATAAGCGACAGCTTCATCAGGATGAATACCCTTGTTTGGTTCTT 1659 Query 281826 TACCATTGAAAAAATTTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAA 281885 | |||| || || | | | || |||| || || || || | ||| || || | Sbjct 1660 TTCCATCAAAGAATTCTTTTAAAATTTGTTGAACTTTTGGGATTCTGCTTGAACCACCTA 1719 Query 281886 CTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAA 281945 | || |||| ||| | | | | ||| | ||| | |||| || ||||| | || Sbjct 1720 CCAACACAACTTCGTCAATTTCAGTTTTCTTAAGTCCGGCATCCTTCAATACTTTCTTAA 1779 Query 281946 CGGGTTCAAGACCAGCTCTAAACAAGTC--TGAACAAAGTTCTTCGAATTTAGCTCTAGT 282003 || || | | | | ||||| | || ||| |||||||||||| ||||| || Sbjct 1780 TAGGATCGACAGTCGAACGGAACAAATTCATGTTCAA--TTCTTCGAATTTGGCTCTTGT 1837 Query 282004 AAGAGTGACATTATA---ATCAATTCCTTCG--AACAAAGAAT-CAACTTCAATCGTAGT 282057 ||||| || | | | || ||||| | || | | | | ||||| || || Sbjct 1838 AAGAGGAACGCTCAACGGAACAGAGCCTTCTCCATCAGGGTTTTCTAATTCAACTGTGGT 1897 Query 282058 TTGAGTCGAAGAAGATAGTGCA-----CGTTTAGCACGTTCACATGCTGTCCTTAGTCTT 282112 || || || | | | || | |||||| | ||| || || |||||| Sbjct 1898 TTT-GT----GATGTTTGCTCAACATTCTTTTAGCTCTTTCCGCGGCACGTCTAAGTCTT 1952 Query 282113 CGTAAGGCTTTTGCTGATTGATTCAAATCTGT--TTTATATTTTCTCTTGAAATCTTCAA 282170 | | ||||||| | ||| | |||| | ||| | | || | ||| || || | Sbjct 1953 TGCATGGCTTTT--TTATTTTTGGAAATATCAACTTTTTCTGTTTTTTTGTGATAATCCA 2010 Query 282171 CACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACG 282230 | || || | |||| | || |||||||||| ||||||||| | ||| || || | Sbjct 2011 CGCAGTATTTAACAACATTGTTGTCAAAATCTTGACCTCCCAAATGAGTGTTACCACTAG 2070 Query 282231 TAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCAC 282290 | || | |||| || | |||| || | || | || || ||||||| ||||| | Sbjct 2071 TGGCAATAACTTCAAAGACTCCACTATCGACAGTAAGAACAGACACATCATAAGTTCCGC 2130 Query 282291 CACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACG 282350 |||| | |||||| ||||| ||| || |||| ||||| ||||| ||||| || | Sbjct 2131 CACCAAGATCAAAGATAAGAACAGTCTTTTCGCCATCTTG---TTTATTGAGACCGTATG 2187 Query 282351 CAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTC 282410 ||| ||||||||| || || ||||| || ||||| ||| || | ||| ||||| | Sbjct 2188 CAATAGCAGCAGCTGTAGGCTCATTGATGATTCTTTCAACTTTTAAACCTGCAATAGCAC 2247 Query 282411 CTGCATCTT-TAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACG 282469 | || ||| | || || ||||| ||||| |||| || ||||||||||| || || Sbjct 2248 CAGC-TCTGCTTGTTGCGACCCTTTGAGAATCCGTAAAGTAAGCAGGAACAGTTATGACA 2306 Query 282470 GCA 282472 ||| Sbjct 2307 GCA 2309 >seq61178 Length=12939 Score = 136 bits (150), Expect = 3e-26 Identities = 290/428 (68%), Gaps = 20/428 (5%) Strand=Plus/Plus Query 400252 AAATTATATAATGCTCACAAAGCAGGAACCAAAGAAGGATATAAATGTACCCTAATTTTG 400311 ||||| || ||||| ||||||| || | | | || |||||| || || || Sbjct 7900 AAATTGGATGATGCTAACAAAGCCGGCTCAGCATTATCATCTAAATGCGTTCTTATACTG 7959 Query 400312 ACAGAGGGAGATTCAGCTAAAACATTCGCTATGTCTGGCCTTAATGTTATTGGAAGAGAT 400371 || |||||||||||||||||| |||| ||| | |||| || | | | ||||| |||||| Sbjct 7960 ACGGAGGGAGATTCAGCTAAATCATTAGCTGTTGCTGGTCTCAGTATCATTGGGAGAGAT 8019 Query 400372 TATTATGGAGTTTTCCCACTTAGAGGAAAACTTTTGAATGTTAGGGATGCTAGTCCTaaa 400431 ||||| || || || || |||||||| ||| | |||||||| || |||| | | | | Sbjct 8020 TATTACGGTGTATTTCCTCTTAGAGGTAAATTATTGAATGTCAGAAATGCCACTTATTCA 8079 Query 400432 aaaaTTGCCGATAATGAGGAAATTAC-AG--CAATCaaaaaaaTTGTTGGACTTGAA--- 400485 || || | | |||| |||||| | || ||||||| | |||| ||| || Sbjct 8080 AATATAATCAAAAATGCCGAAATTTCGAGTTTGATCAAAA----TATTGGGCTTAAATTT 8135 Query 400486 -CAAGGAAAAGTTTATGA------TGATCTCAAAGGTTTACGATATGGTAGTATTATGAT 400538 || | ||| | |||| |||| || | || |||| || | |||||||| Sbjct 8136 CAAATGTAAATATAATGAAAAAAGTGATTACAGATCATTGAGATACGGAAAAATTATGAT 8195 Query 400539 TCTTGCTGATCAAGATGTTGATGGGTACCATATCAAAGGATTAATCATGAATTTTATCCA 400598 | | | |||||||||| ||||| | ||||| ||||| | || || || ||||| || Sbjct 8196 TATGACAGATCAAGATGAAGATGGTTCTCATATTAAAGGTCTGATTATCAACTTTATTCA 8255 Query 400599 TTGTTTTTGGCCATCTCTTGTTAAATACGAAGGGTTTATTCAATCATTTGCAACTCCACT 400658 || | |||||| | ||| || | | | || ||||||||||| || |||||| | Sbjct 8256 TTCATATTGGCC-TAAGTTGATACAAA--ATGGATTTATTCAATCCTTCATAACTCCTTT 8312 Query 400659 ATTAAAAG 400666 | |||||| Sbjct 8313 AATAAAAG 8320 >seq46752 Length=2303 Score = 111 bits (122), Expect = 1e-18 Identities = 140/190 (74%), Gaps = 2/190 (1%) Strand=Plus/Minus Query 637107 TATTACAAAGAAAATTATTGTCGATTATTCTTCTCCAAATATTGCTAAAGAAATGCATAT 637166 |||| | ||||| | | || || | ||| ||||| |||||||| ||| |||||||| | Sbjct 1929 TATTCCTAAGAATGTAGTAGTGGACTTTTCATCTCCTAATATTGCAAAACAAATGCATGT 1870 Query 637167 TGGACATTTAAGATCAACTATTATTGGTGAATCTATTTGTAGGGTATTAGAAATGTGTGG 637226 ||||||| | | ||||| |||||||| || | || || || |||| || | | || Sbjct 1869 TGGACATCTTCGTTCAACAATTATTGGGGATTGCATATGCAGATTATTTGAG-TATTTGA 1811 Query 637227 ACA-CGATGTTTATCGTATTAATCATGTGGGTGATTGGGGAACTCAATTCGGTATGTTAA 637285 | |||||| |||| | ||||| || ||||||||||||||||| ||||| ||| | | Sbjct 1810 ATTGCGATGTGAGTCGTGTGAATCACGTAGGTGATTGGGGAACTCAGTTCGGAATGCTCA 1751 Query 637286 TTGCTTATAT 637295 | |||| ||| Sbjct 1750 TAGCTTTTAT 1741 >seq5965 Length=592 Score = 95.1 bits (104), Expect = 9e-14 Identities = 138/191 (72%), Gaps = 3/191 (2%) Strand=Plus/Plus Query 282338 TCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGA 282397 |||| |||| | |||| |||||| |||||||||||||| || || | ||||| | | Sbjct 199 TCAA-ACCAAAAGCAAGAGCAGCGGCAGTTGGTTCATTGATTATACGAGCAACATCTAAA 257 Query 282398 CCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGA 282457 |||||||| ||||||| ||| || | | ||| || || || ||||| |||||| Sbjct 258 CCAGCAATCTGGCCTGCATTTTTTGTAGAAGAACGTTGCGAGTCATTGAAATACGCAGGA 317 Query 282458 ACAGTAATAACGGCATCTGTTA-CTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCAT 282516 || |||| || |||| | | | |||| || |||| ||| || ||| ||| |||||| Sbjct 318 ACTGTAACTACAGCATTTTTAACCTTCATTCCCAA-ATATGCTTCTGCAGTTGATTTCAT 376 Query 282517 TTTACTTAAAA 282527 ||| |||||| Sbjct 377 TTTCGTTAAAA 387 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3737240582284170