Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enteromyxum_20leei_20[genbank_20GCA_5F001455295.1_202015-12-02] 69,045 sequences; 67,975,573 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq24282 132 9e-26 seq16394 114 3e-20 >seq24282 Length=3510 Score = 132 bits (146), Expect = 9e-26 Identities = 116/142 (82%), Gaps = 2/142 (1%) Strand=Plus/Plus Query 82671 CCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGC- 82729 || ||||| || | |||||| ||||||||||| |||||||| ||||||||||| ||||| Sbjct 2 CCTGCAAAAATCAATCTTTGCTGATCTGGAGGAATTCCTTCTTTATCTTGAAT-TTTGCT 60 Query 82730 TTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAA 82789 ||||||| | ||||| | ||| |||||||| || || | |||||| |||||||| || | Sbjct 61 TTTTACAATCTCAATGGCATCGTTAGGTTCAACATCAAGAGTTATGGTCTTGCCAGTAAG 120 Query 82790 CGTCTTTACAAATATCTGCATT 82811 || || || |||||||||||| Sbjct 121 TGTTTTGACGAATATCTGCATT 142 >seq16394 Length=525 Score = 114 bits (126), Expect = 3e-20 Identities = 104/131 (79%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 82581 CTACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCA 82640 || ||||||||||| | || || || || || || ||||||||||| || || || ||| Sbjct 394 CTGCCTCCTCTCAATCTCAACACCAAATGTAGGGTTGATTCTTTCTGGATGTTGTAGTCA 453 Query 82641 GATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGA 82700 | || | | ||||| ||||| |||||||| || ||||| || | |||||| ||||||||| Sbjct 454 GTTAAAGTCCTACCATCTTCGAGTTGTTTACCTGCAAAAATCAATCTTTGCTGATCTGGA 513 Query 82701 GGTATTCCTTC 82711 || |||||||| Sbjct 514 GGAATTCCTTC 524 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 980958637306255