Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enteromyxum_20leei_20[genbank_20GCA_5F001455295.1_202015-12-02] 69,045 sequences; 67,975,573 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq22640 302 6e-77 seq25167 141 1e-28 seq59245 107 3e-18 >seq22640 Length=3951 Score = 302 bits (334), Expect = 6e-77 Identities = 759/1144 (66%), Gaps = 31/1144 (3%) Strand=Plus/Minus Query 68710 TTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGT 68769 || || || ||||||||||||||||| || | ||| | |||||||| | ||||| ||| Sbjct 1956 TTCACAATCTGAAATTCCCCAGATAAAACACGTCGATTATAAATATTTGTTGTATAAGGT 1897 Query 68770 TCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACC 68829 || | |||||| || ||||||| ||||||| ||||| || || ||||| ||||| | Sbjct 1896 TCAATAGATTCGTTGTTTCCCATTATTTGAGACGTTGACGCCGTAGGCATTGGTGCAATT 1837 Query 68830 AATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATG-TTTCCAATCCCA 68888 || | ||||||||||| ||||||| |||||||| |||| | ||| |||||||||||| Sbjct 1836 AAAAGACTATTTCTAACACCATGTTCCTTGATTTTAGCTTTCA-ATGATTTCCAATCCCA 1778 Query 68889 AAGATCAGATGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGA 68948 | ||||| || || |||||| | || ||||||| || || | | | ||| Sbjct 1777 TAAATCAGTAGGAGTAATATTCCACATGTCATATTGTAAGATACCTTGAGATATGGGTGA 1718 Query 68949 TCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGC 69008 | || || || || || | | || ||| |||||| | ||| | ||| Sbjct 1717 ATCTTTGTAAGTGGAGTATACGCCATGTTCTTTTGCTTCTTCACATGAAGACTCAAGTGC 1658 Query 69009 ACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGAT-CTTGTGCTTCTAGACTATCGA 69067 | | ||| |||||||| || || | |||| | | | || |||||| ||||||| Sbjct 1657 GGCATGATATATTGTTTCAAATATTTCAATATTCAACTTCCTG-GCTTCTGCGCTATCGA 1599 Query 69068 ATGGATAATGTAAAAGA-ATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGT 69126 |||| | | ||| || |||||||| || | || || || ||||| || | |||| Sbjct 1598 ATGGC-ATTCTAAGTTTGATGAATGCATCAGCAAGACCTTGTACGCCAATTCCTACAGGT 1540 Query 69127 CTATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATT 69186 ||||| | | |||||||| ||| |||||| || ||||| |||| | ||| || || Sbjct 1539 CTATGACGCATATTTGAATTTTTTGCTTCTATAACGGGATAGAAATTCAAATCAATTATC 1480 Query 69187 TTATTAAGATTTCGGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATCGT 69246 ||||| | || |||| |||||| || || | || || |||| |||| | Sbjct 1479 TTATTCAAGTTCTTAACTATTACTTTTGTGACCTCATGAAGCTTTTTGAAATGAAATGTT 1420 Query 69247 CCA------TCTAT---------------AACAAACATATTCAGTGCTACAGATGCTAGA 69285 | ||| | ||||||| | ||| || ||| ||||| Sbjct 1419 TTAGTATTATCTTTTTCAGATTTTGAATAAACAAACTTCGGCAGACATATAGAAGCTAGG 1360 Query 69286 TTACAAACTGCTACCTCATTAGAATTTGCATATTGTATTATCTCTGTACATAGATTACTA 69345 || || || || |||| || | || | | || || ||||| | ||| || Sbjct 1359 TTGCACACAGCGGTTTCATCTTTATCAGAGTACTCAACAATTTCAGTACACAAATTGCTT 1300 Query 69346 CATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGA 69405 | ||||| || | ||||| |||||| || || || || || ||||||| Sbjct 1299 GACTTGATCACTCCAACATTTTTTTGATTAGATTTGCGATTGCATGCATCTTTGTAAACC 1240 Query 69406 ATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCA 69465 || | || |||||||||| || |||| ||| | |||||| ||| | || ||| Sbjct 1239 ATGTATGGCATACCAGTTTCTATTTGAGCTTCCAAAATAGAAAACCACAAAGCCTGAGCG 1180 Query 69466 TTTATTACGGTCTTGTAACGCTTCTCTTTTTCATATTGTGTATATAGCCGTTCGAATTCA 69525 || ||| |||| ||||| || || |||||| | ||| || ||| | ||||| Sbjct 1179 TTAATTTGCTTCTTATAACGTTTTTCAGATTCATACTTTGTGTAAAGCTTATTAAATTCT 1120 Query 69526 TCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCA 69585 || || | |||| ||||| || |||||| |||||||||||| |||||| ||| Sbjct 1119 TCACCGTAGCAATCAGATAATCCTGGTGATTCATGTGGACACATCAAAGACCACTTTTCA 1060 Query 69586 TCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTG 69645 | || || || || | |||||||| ||| || ||||| | || ||| | ||||| Sbjct 1059 TTATTTTTTACACGCTCCATAAATAAATCCGGTATCCATAATGCATAAAACAAGTCTCTA 1000 Query 69646 GTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAA 69705 | | |||||| | || || |||||| | | || | ||| || | ||||| || Sbjct 999 GCGCGTACTTCTTCGCTGCCAGTGTTTTTTCTCAATTCTAAAAATTCTTTTATATCTGAG 940 Query 69706 TGCCATGGTTCTAGATATATCGC-CATGACTCCCGGTCGTTTATTTCCTCCCTGATCTAT 69764 ||||| ||||| || || | || |||| || || || |||||||| || ||||||| Sbjct 939 TGCCACGGTTCGAGGTAAACAGCAAATGA-ACCAGGGCGCTTATTTCCACCTTGATCTAC 881 Query 69765 GTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAA-TAATACCATTAGATTTACCAT 69823 |||||||| ||||| || || ||||||| || ||||| |||| ||||| ||| | |||| Sbjct 880 GTATCTGGACGTGTTGTTGTACACTCTCAACAACGGAACTAAT-CCATTTGATATTCCAT 822 Query 69824 TTGT 69827 | || Sbjct 821 TAGT 818 Score = 107 bits (118), Expect = 3e-18 Identities = 191/276 (69%), Gaps = 2/276 (1%) Strand=Plus/Minus Query 69913 TTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTA 69972 |||| || ||| | || || || |||||||| ||| |||| | |||||| || || Sbjct 513 TTCAGGGTATCAAAAATGCCTTCAATGCTATCGTCTTTCATAGCGACAAGAAAGCAACTG 454 Query 69973 GACATTTGATGATGTAT-AGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCA 70031 |||||||| || | | ||| || | || || || ||||| | |||||||| ||||| Sbjct 453 GACATTTG-TGGTCTGGGAGTACCGGAGTTGAACAAAGTAGGTGTGGCGTGAGTAAACCA 395 Query 70032 TTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATCCCACTGATGAATTCC 70091 | ||||| | | |||||| ||||||||||| | || ||||| | || ||||| Sbjct 394 TCCATCAGACATTAAATTGTAAGTTTCAATAGCGGCATCAATATCATTCATGTGTATTCC 335 Query 70092 TATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAA 70151 | || || | ||||| ||| || || |||| ||| || ||| || ||| ||| Sbjct 334 AACAGCCACTCTCATCAGCATGTGTTGTGGTCTTTCAACAACAATATCGTTGATTCTCAT 275 Query 70152 CAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATA 70187 || || || |||| || ||||| || |||||||| Sbjct 274 CAAATACGACCTTTCAAGTGTTTTGAAGCCAAAATA 239 Score = 87.8 bits (96), Expect = 2e-12 Identities = 143/204 (70%), Gaps = 4/204 (2%) Strand=Plus/Minus Query 68353 TTTATTTTATCCTTATCCAATGTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGA 68412 || |||||||| |||| | ||||| ||||| || | ||||| ||| | ||| Sbjct 2348 TTAATTTTATCGGTATCAACAGTAAATTGAATAGGATTTGCACCGGGTCTTGATCTAAGA 2289 Query 68413 TAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTT- 68471 |||||||| || ||||| || || | |||||||||| |||||||| || || ||||| Sbjct 2288 TAGTACATTCCAGTTTTGAGGCCCTTATTCCATCCGTAAAAATGCATGCTAGTAAGTTTT 2229 Query 68472 -GGAATAACTTGGATCGGCTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTC 68530 || | | || || || ||| || || | |||||||||||||| || |||| | Sbjct 2228 CCGACTGA--AGGTTCAGCCATAAAAACGTTGAAAGATTGACTTTGATCAATAAAAGGAC 2171 Query 68531 CTCTATCTGCCGCCATTTTTATAA 68554 | | ||| || ||||| | |||| Sbjct 2170 CACGATCAGCAGCCATATCAATAA 2147 >seq25167 Length=1585 Score = 141 bits (156), Expect = 1e-28 Identities = 204/285 (72%), Gaps = 6/285 (2%) Strand=Plus/Minus Query 39790 ATGTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGC 39849 || |||||| || | ||||| ||||||||||| | |||| | || ||| || || Sbjct 1339 ATTTATCCAGTTGAGAGCCCACTCAGCTTTCTTTCTGACACTACTTATATGTTCAATTGC 1280 Query 39850 ATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATA 39909 ||| ||| | | |||| |||||| | ||| || || || ||||| || || Sbjct 1279 GCCAAAAAGACGTTCTCTTTCTAATGGATCTTTGATATAAGTGTCGATCAACAGGCTGTA 1220 Query 39910 CATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGT 39969 ||||||||| || || |||||||| || || || | ||| ||||| ||||| |||||| Sbjct 1219 CATTTCTGAGTGAATATTTTCAATTGCAATTTGCAGTCCATAAAAGCATCTGACTTCAGG 1160 Query 39970 AATTTGTACCTC---TGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACT 40026 |||||| || || ||||| | ||| |||| |||||||| || || |||||||| Sbjct 1159 CCATTGTACTTCACTTG--CAAAA-CATTCAACCAAGTTTTCATTTACAATACCATCACT 1103 Query 40027 AGCGGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATC 40071 || ||||| || |||||||||||| | ||||| |||||| || Sbjct 1102 GGCAGCAAAGAACGCCAATACATGTGATACAAAATGTTTTTCTTC 1058 >seq59245 Length=1049 Score = 107 bits (118), Expect = 3e-18 Identities = 191/276 (69%), Gaps = 2/276 (1%) Strand=Plus/Plus Query 69913 TTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTA 69972 |||| || ||| | || || || |||||||| ||| |||| | |||||| || || Sbjct 537 TTCAGGGTATCAAAAATGCCTTCAATGCTATCGTCTTTCATAGCGACAAGAAAGCAACTG 596 Query 69973 GACATTTGATGATGTAT-AGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCA 70031 |||||||| || | | ||| || | || || || ||||| | |||||||| ||||| Sbjct 597 GACATTTG-TGGTCTGGGAGTACCGGAGTTGAACAAAGTAGGTGTGGCGTGAGTAAACCA 655 Query 70032 TTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATCCCACTGATGAATTCC 70091 | ||||| | | |||||| ||||||||||| | || ||||| | || ||||| Sbjct 656 TCCATCAGACATTAAATTGTAAGTTTCAATAGCGGCATCAATATCATTCATGTGTATTCC 715 Query 70092 TATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAA 70151 | || || | ||||| ||| || || |||| ||| || ||| || ||| ||| Sbjct 716 AACAGCCACTCTCATCAGCATGTGTTGTGGTCTTTCAACAACAATATCGTTGATTCTCAT 775 Query 70152 CAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATA 70187 || || || |||| || ||||| || |||||||| Sbjct 776 CAAATACGACCTTTCAAGTGTTTTGAAGCCAAAATA 811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686315954773800