Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enteromyxum_20leei_20[genbank_20GCA_5F001455295.1_202015-12-02] 69,045 sequences; 67,975,573 total letters Query= NC_028104.1 Length=73689 Score E Sequences producing significant alignments: (Bits) Value seq61178 122 4e-23 >seq61178 Length=12939 Score = 122 bits (134), Expect = 4e-23 Identities = 202/288 (70%), Gaps = 4/288 (1%) Strand=Plus/Minus Query 65093 CCAAACTGACCATTTGGCATTAATAAATTAATATTGTTTGAACCAATAAAATTCTGAGCC 65152 |||||||||||| || | |||||||| ||||| || ||| | ||||| ||||| Sbjct 8954 CCAAACTGACCAAGAGGAAGCAATAAATTTATATTATTACTACCTACAAAATCTTGAGCA 8895 Query 65153 ATTCCGATAATTGCTGCATTTAAACTCGCTTCACCGTGATGATATCCTGAATGTTCAGAG 65212 | || ||||| | | | | || |||||||| ||||||||| ||| |||||| Sbjct 8894 AGGCCAATAATAGTCGAAGCCATGCTTGCTTCACCATGATGATATGCTGTCAATTCAGAA 8835 Query 65213 ACATATCCACTAAATTGAGCAACTTTTATTTCCGTTGTTAAAT-TCTTTTTAA-ATGCAG 65270 ||| ||| |||||||||||||| ||||| || || || |||||| || ||| | Sbjct 8834 ACAGCACCAGCTAATTGAGCAACTTTGATTTCTTTTTTTTCATATCTTTTAAACATG--G 8777 Query 65271 AATACAATATTTTCCGTAAACTAATTTTCAATCCATCCATTAAATTAGGAATGCTTCTGT 65330 ||| || | ||| | | |||| ||| ||||||||||| | |||||||| ||| | Sbjct 8776 TATATAAAACTTTTCTTTGACTAGGTTTTAATCCATCCATAATGTTAGGAATAGCTCTTT 8717 Query 65331 CACAATCATATTTTGAGAAATGTATGAATTCTTTGTTAATAAATTCTT 65378 | |||| ||||| || || | ||||| |||| ||||| |||| Sbjct 8716 GATTATCAGCATTTGAAAACTGAACTAATTCCATGTTGATAAAATCTT 8669 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 235481678594250