Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enteromyxum_20leei_20[genbank_20GCA_5F001455295.1_202015-12-02] 69,045 sequences; 67,975,573 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq68710 102 9e-17 seq67756 102 9e-17 seq59245 87.8 2e-12 seq22640 87.8 2e-12 >seq68710 Length=718 Score = 102 bits (112), Expect = 9e-17 Identities = 88/109 (81%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 60003 GTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGC 60062 ||||| ||||||||||||||||| || ||| ||| || |||||||| || ||| | ||| Sbjct 434 GTGGAGGGAATCTTCTTCTCTGGTTCCTTCGCTGCCATCTTCTGGCTGAAGAAGAGAGGC 375 Query 60063 CTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGG 60111 || ||||| ||||||| |||||||||||||| || | | ||||||| Sbjct 374 CTGATGCCCGGCCTGACCTTCTCCAACGAGCTCATCAGCAGAGACGAGG 326 >seq67756 Length=723 Score = 102 bits (112), Expect = 9e-17 Identities = 88/109 (81%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 60003 GTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGC 60062 ||||| ||||||||||||||||| || ||| ||| || |||||||| || ||| | ||| Sbjct 285 GTGGAGGGAATCTTCTTCTCTGGTTCCTTCGCTGCCATCTTCTGGCTGAAGAAGAGAGGC 344 Query 60063 CTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGG 60111 || ||||| ||||||| |||||||||||||| || | | ||||||| Sbjct 345 CTGATGCCCGGCCTGACCTTCTCCAACGAGCTCATCAGCAGAGACGAGG 393 >seq59245 Length=1049 Score = 87.8 bits (96), Expect = 2e-12 Identities = 129/180 (72%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 79630 GCCCGAATGTTCGAGCA-GTGGATTCCGATGCCCCCGGACCACTTGGAGATGTGCGCGCA 79688 |||| |||||| | ||| ||| || || || || |||| | || || ||| | | ||| Sbjct 474 GCCCTAATGTT-GTGCATGTGTATGCCAATTCCACCGGCATATTTCGAAATGAGTGAGCA 532 Query 79689 CTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCA 79748 ||||| || || || | ||||| || || ||||| ||||||||||| || ||||| Sbjct 533 TTCCTTCAGGGTATCAAAAATGCCTTCAATGCTATCGTCTTTCATAGCGACAAGAAAGCA 592 Query 79749 GCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAA 79808 || ||||| ||||| || ||||||| |||||| | || || || ||||| || || Sbjct 593 ACTGGACATTTGTGGTCTGGGAGTACCGGAGTTGAACAAAGTAGGTGTGGCGTGAGTAAA 652 >seq22640 Length=3951 Score = 87.8 bits (96), Expect = 2e-12 Identities = 129/180 (72%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 79630 GCCCGAATGTTCGAGCA-GTGGATTCCGATGCCCCCGGACCACTTGGAGATGTGCGCGCA 79688 |||| |||||| | ||| ||| || || || || |||| | || || ||| | | ||| Sbjct 576 GCCCTAATGTT-GTGCATGTGTATGCCAATTCCACCGGCATATTTCGAAATGAGTGAGCA 518 Query 79689 CTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCA 79748 ||||| || || || | ||||| || || ||||| ||||||||||| || ||||| Sbjct 517 TTCCTTCAGGGTATCAAAAATGCCTTCAATGCTATCGTCTTTCATAGCGACAAGAAAGCA 458 Query 79749 GCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAA 79808 || ||||| ||||| || ||||||| |||||| | || || || ||||| || || Sbjct 457 ACTGGACATTTGTGGTCTGGGAGTACCGGAGTTGAACAAAGTAGGTGTGGCGTGAGTAAA 398 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548051388814800