Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enteromyxum_20leei_20[genbank_20GCA_5F001455295.1_202015-12-02] 69,045 sequences; 67,975,573 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq22640 235 8e-57 seq25167 131 2e-25 seq59245 93.3 6e-14 seq7759 91.5 2e-13 >seq22640 Length=3951 Score = 235 bits (260), Expect = 8e-57 Identities = 754/1152 (65%), Gaps = 47/1152 (4%) Strand=Plus/Minus Query 75713 TTAACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGT 75772 || ||||| |||||||| ||||| || || | |||| | |||||||| | ||||| ||| Sbjct 1956 TTCACAATCTGAAATTCCCCAGATAAAACACGTCGATTATAAATATTTGTTGTATAAGGT 1897 Query 75773 TCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACC 75832 || | |||||| |||||||||| ||||||| ||||| || || ||||| ||||| | Sbjct 1896 TCAATAGATTCGTTGTTTCCCATTATTTGAGACGTTGACGCCGTAGGCATTGGTGCAATT 1837 Query 75833 AATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAA 75892 || | ||||||||| | ||||||| |||||||| |||| | ||||||||||||| Sbjct 1836 AAAAGACTATTTCTAACACCATGTTCCTTGATTTTAGCTTTCAATGATTTCCAATCCCAT 1777 Query 75893 AGATCTGATGGTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATA---- 75948 | ||| | || || || ||| | || ||||||| || || ||| || ||| Sbjct 1776 AAATCAGTAGGAGTAATATTCCACATGTCATATTGTAAGATACC-TTG--AG-ATATGGG 1721 Query 75949 TGATCCATTATATGTTTCG--TAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCT 76006 ||| | || || || | || | | || ||||| ||| ||| || | ||| Sbjct 1720 TGAATCTTTGTAAGTGGAGTATACGCCATGTTCTTTT--GCTTCTTCACATGAAGACTCA 1663 Query 76007 AACGCACCGTAATAAATTGTTTCGAAAATCTTCTTATT-AAGATCTTGCGCTTCAAGACT 76065 | || | | ||| |||||||| || || | |||| || || || ||||| || Sbjct 1662 AGTGCGGCATGATATATTGTTTCAAATATTTCAATATTCAACTTCCTG-GCTTCTGCGCT 1604 Query 76066 ATCAAAAGGATAATGTAA-AAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAA 76124 ||| || || | | ||| || |||||||| || || || || || ||||| || | Sbjct 1603 ATCGAATGG-CATTCTAAGTTTGATGAATGCATCAGCAAGACCTTGTACGCCAATTCCTA 1545 Query 76125 TAGGTCTATGTCTCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTA 76184 ||||||||| | | |||| ||| ||| |||||| || || || |||| | ||| | Sbjct 1544 CAGGTCTATGACGCATATTTGAATTTTTTGCTTCTATAACGGGATAGAAATTCAAATCAA 1485 Query 76185 TAATTTTATTGAGATTTCTGACAACTACTTTAACCACGTCCTTTAG---TTTGA---GAA 76238 | || ||||| | || | || | |||||| || || | || ||||| ||| Sbjct 1484 TTATCTTATTCAAGTTCTTAACTATTACTTTTGTGACCTCATGAAGCTTTTTGAAATGAA 1425 Query 76239 A---------ATCAAATTTTCCATCTAT------CACAAACATATTAAGAGCTATAGATG 76283 | || | |||| || | | |||||| | ||| |||||| | Sbjct 1424 ATGTTTTAGTATTATCTTTTTCAGATTTTGAATAAACAAACTTCGGCAGACATATAGAAG 1365 Query 76284 CTAGATTACA---AACGGCTACCTCATTAGCATTGGCATATTGTATTATCTCCGTGCATA 76340 |||| || || | ||| | | || ||| || | || | | || || || || | Sbjct 1364 CTAGGTTGCACACAGCGGTTTCATCTTTATCA---GAGTACTCAACAATTTCAGTACACA 1308 Query 76341 GATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCT 76400 ||| || ||||||| ||||| ||||| ||| || || || |||| || | Sbjct 1307 AATTGCTTGACTTGATCACTCCAACATTTTTTTGATTAGATTTGCGATTGCATGCATCTT 1248 Query 76401 TATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGA 76460 | |||| | | || | |||||||| || || | ||| | |||||| ||| | Sbjct 1247 TGTAAACCATGTATGGCATACCAGTTTCTATTTGAGCTTCCAAAATAGAAAACCACAAAG 1188 Query 76461 CTCTAGCTTTTATTATAGATTTGTATCGCTTCTCTCTTTCATATTGTGTATATAACCGTT 76520 | ||| || ||| || || || || || |||||| | ||| || | | | Sbjct 1187 CCTGAGCGTTAATTTGCTTCTTATAACGTTTTTCAGATTCATACTTTGTGTAAAGCTTAT 1128 Query 76521 CAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGACC 76580 |||||| || || | |||| || || || |||||| ||||||||||| |||| Sbjct 1127 TAAATTCTTCACCGTAGCAATCAGATAATCCTGGTGATTCATGTGGACACATCAAAGACC 1068 Query 76581 ACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATA 76640 ||| ||| | || || || | |||||| | ||| |||||||||| ||| ||| | Sbjct 1067 ACTTTTCATTATTTTTTACACGCTCCATAAATAAATCCGGTATCCATAATGCATAAAACA 1008 Query 76641 GATCTCGGGTTC-TACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATA 76699 |||| | | ||| |||||| | || || || ||| | | |||| || || | Sbjct 1007 AGTCTCTAGCGCGTAC-TTCTTCGCTGCCAGTGTTTTTTCTCAATTCTAAAAATTCTTTT 949 Query 76700 ATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCC 76759 ||||| || ||||| ||||| || || | || | ||| || || ||||| || || Sbjct 948 ATATCTGAGTGCCACGGTTCGAGGTAAACAGCAAATGAACCAGGGCGCTTATTTCCACCT 889 Query 76760 TGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAA-TAATGCCGTTAGA 76818 ||||||| ||||||| ||||| || || |||||||||| |||| |||| || || || Sbjct 888 TGATCTACGTATCTGGACGTGTTGTTGTACACTCTCAACAACGGAACTAAT-CCATTTGA 830 Query 76819 TGTACCATTTGT 76830 | | ||||| || Sbjct 829 TATTCCATTAGT 818 Score = 95.1 bits (104), Expect = 2e-14 Identities = 160/228 (70%), Gaps = 8/228 (4%) Strand=Plus/Minus Query 75356 TTTATTTTATTCTTATCCAACGTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGA 75415 || ||||||| |||| | || || ||||| ||| | | ||| ||| | ||| Sbjct 2348 TTAATTTTATCGGTATCAACAGTAAATTGAATAGGATTTGCACCGGGTCTTGATCTAAGA 2289 Query 75416 TAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTT- 75474 |||||||| |||||||| || ||| | |||||||||| ||||||||||| || ||||| Sbjct 2288 TAGTACATTCCAGTTTTGAGGCCCTTATTCCATCCGTAAAAATGCATGCTAGTAAGTTTT 2229 Query 75475 -GGAATAACTCGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTC 75533 || | | || || || ||| || || | || ||||||||||| || |||| | Sbjct 2228 CCGACTGA--AGGTTCAGCCATAAAAACGTTGAAAGATTGACTTTGATCAATAAAAGGAC 2171 Query 75534 CTCTATCAGCCGCCATTTTTATAATGGTCTTTTGA--GGAATTTCCCA 75579 | | |||||| ||||| | |||| || |||| | | || |||||| Sbjct 2170 CACGATCAGCAGCCATATCAATAA--GTGTTTTCATTGAAAGTTCCCA 2125 >seq25167 Length=1585 Score = 131 bits (144), Expect = 2e-25 Identities = 146/195 (75%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 46890 ATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATAGC 46949 |||||| | ||| || || || || || || ||||||||||| ||||| |||||||| || Sbjct 1252 ATCTTTGATATAAGTGTCGATCAACAGGCTGTACATTTCTGAGTGAATATTTTCAATTGC 1193 Query 46950 CATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTC 47009 || || | ||| ||||| ||||| |||||| ||||| || | ||| | ||| Sbjct 1192 AATTTGCAGTCCATAAAAGCATCTGACTTCAGGCCATTGTACTTCACTTGCAAAACATTC 1133 Query 47010 AGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAAT 47069 | ||| || ||||| || || |||||||| |||||||| || |||||||||||| | Sbjct 1132 AACCAAGTTTTCATTTACAATACCATCACTGGCAGCAAAGAACGCCAATACATGTGATAC 1073 Query 47070 AAAATATTTTTCATC 47084 ||||| |||||| || Sbjct 1072 AAAATGTTTTTCTTC 1058 >seq59245 Length=1049 Score = 93.3 bits (102), Expect = 6e-14 Identities = 160/227 (70%), Gaps = 4/227 (2%) Strand=Plus/Plus Query 76606 CATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTC-TACGTTCTTCAT 76664 |||||| | ||||||||||||| ||| ||| | |||| | | ||| |||||| Sbjct 8 CATAAATAAGTCAGGTATCCATAATGCATAAAACAAGTCTCTAGCGCGTAC-TTCTTCGC 66 Query 76665 TTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGAT 76724 | || || || ||| | | |||| || || | ||||| || ||||| ||||| || | Sbjct 67 TGCCGGTGTTTTTTCTCAATTCTAAAAATTCTTTTATATCTGAGTGCCACGGTTCGAGGT 126 Query 76725 ATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTAT 76784 | | || | ||| || || ||||| || || ||||||| ||||||| ||||| | Sbjct 127 AAACAGCAAATGAACCAGGGCGCTTATTTCCACCTTGATCTACGTATCTGGACGTGTTGT 186 Query 76785 TATAAACTCTCAACATTGGAA-TAATGCCGTTAGATGTACCATTTGT 76830 | || |||||||||| |||| |||| || || ||| | ||||| || Sbjct 187 TGTACACTCTCAACAACGGAACTAAT-CCATTTGATATTCCATTAGT 232 >seq7759 Length=1813 Score = 91.5 bits (100), Expect = 2e-13 Identities = 113/151 (75%), Gaps = 4/151 (3%) Strand=Plus/Minus Query 77351 TTTGTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATTGCATAGTCAGGA 77410 || || ||||| || ||||| || || | ||||| ||||||| || |||| |||||| Sbjct 1592 TTAGTCTCCTTATGAAGATTTGAGACAACAATTCTTGCAGCTAAAACGCCATAATCAGGA 1533 Query 77411 TGTTGTGTAGTGCAGGTGGCTGCTATTTCTGCCGCTAAAGTATCTAATTCTATAGTAGTA 77470 |||| || || || || ||||||||||| || ||| | |||||||| | ||||| Sbjct 1532 TGTTTAGTGGTCATAGTTGCAGCTATTTCTGCAGCCAAATTGTCTAATTCACTGGTAGTC 1473 Query 77471 ACTCC--GTTATATAGCCCTTGAATAACTTT 77499 ||||| | ||||| ||| || ||||||||| Sbjct 1472 ACTCCAGGGTATAT-GCCATT-AATAACTTT 1444 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712319093054400