Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucidaris_20tribuloides_20[genbank_20GCA_5F001188425.1_202015-04-14] 637,071 sequences; 2,187,261,492 total letters Query= AC_000005.1 Length=34125 Score E Sequences producing significant alignments: (Bits) Value seq556156 95.1 3e-15 >seq556156 Length=560 Score = 95.1 bits (104), Expect = 3e-15 Identities = 144/203 (71%), Gaps = 7/203 (3%) Strand=Plus/Minus Query 6418 GCCCGCTCATAGGGGTTAAGGGGAGGACCCCAAGGCATGGGGTGTGTGAGGGCCGATGCA 6477 || ||||| || ||||| || || |||||||| ||||||||| || || || || || Sbjct 265 GCGCGCTCGTATGGGTTGAGTGGGGGACCCCATGGCATGGGGGTGGTNAGCGCGGAGGCG 206 Query 6478 TACATGCCGC----AAATATCAT--ATACATATATGGGCTCTTTTAGTACTCCTATGTAA 6531 |||||| | | |||| || | || | ||||||| | |||| ||| | || Sbjct 205 TACATGGCCCGACTAAATGTCCGTAAAACGTGAGGGGGCTCTCTGAGTATTCCAAGATAT 146 Query 6532 GTAGGATAGCACCTGCCGCCACGAATGCTGGCGCGAACGTAGTCATATAGCTCATGTGAA 6591 || || ||||| || || || || ||||||||||| ||||| || ||||| || || || Sbjct 145 GTGGG-TAGCATCTTCCACCGCGGATGCTGGCGCGCACGTAATCGTATAGTTCGTGCGAG 87 Query 6592 GGCGCCAGGATGTTGGGCCCAAG 6614 || || |||| || ||| || || Sbjct 86 GGAGCGAGGAGGTCGGGACCGAG 64 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 108253198111274