Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucidaris_20tribuloides_20[genbank_20GCA_5F001188425.1_202015-04-14] 637,071 sequences; 2,187,261,492 total letters Query= AC_000008.1 Length=35938 Score E Sequences producing significant alignments: (Bits) Value seq556156 416 6e-112 >seq556156 Length=560 Score = 416 bits (460), Expect = 6e-112 Identities = 266/283 (94%), Gaps = 9/283 (3%) Strand=Plus/Minus Query 6649 TGCGCGGGCGGCAAGCGCGCGCTCGTATGGGTTGAGTGGGGGACCCCATGGCATGGGGTG 6708 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 280 TGCGCGGGCG-CAAGCGCGCGCTCGTATGGGTTGAGTGGGGGACCCCATGGCATGGGGGT 222 Query 6709 GGTGAGCGCGGAGGCGTACATGCCGC----AAATGTC-GTAAA-CGTAGAGGGGCTCTCT 6762 ||| |||||||||||||||||| | | ||||||| ||||| ||| |||||||||| Sbjct 221 GGTNAGCGCGGAGGCGTACATGGCCCGACTAAATGTCCGTAAAACGTGAGGGGGCTCTCT 162 Query 6763 GAGTATTCCAAGATATGTAGGGTAGCATCTTCCACCGCGGATGCTGGCGCGCACGTAATC 6822 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 161 GAGTATTCCAAGATATGT-GGGTAGCATCTTCCACCGCGGATGCTGGCGCGCACGTAATC 103 Query 6823 GTATAGTTCGTGCGAGGGAGCGAGGAGGTCGGGACCGAGGTTGCTACGGGCGGGCTGCTC 6882 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 102 GTATAGTTCGTGCGAGGGAGCGAGGAGGTCGGGACCGAGGTTGCTACGGGCGGGCTGCTC 43 Query 6883 TGCTCGGAAGACTATCTGCCTGAAGATGGCATGTGAGTTGGAT 6925 |||||||||| |||||||||||||||||||||||||||||||| Sbjct 42 TGCTCGGAAG-CTATCTGCCTGAAGATGGCATGTGAGTTGGAT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 114010907741800