Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucidaris_20tribuloides_20[genbank_20GCA_5F001188425.1_202015-04-14] 637,071 sequences; 2,187,261,492 total letters Query= AC_000011.1 Length=36519 Score E Sequences producing significant alignments: (Bits) Value seq556156 179 9e-41 >seq556156 Length=560 Score = 179 bits (198), Expect = 9e-41 Identities = 206/272 (76%), Gaps = 8/272 (3%) Strand=Plus/Minus Query 6540 GCCAGCGCGCGCTCGTAGGGACTGAGGGGCGTGCCCCAGGGCATGGGATGGGTAAGCGCG 6599 || |||||||||||||| || |||| || | ||||| |||||||| ||| |||||| Sbjct 271 GCAAGCGCGCGCTCGTATGGGTTGAGTGGGGGACCCCATGGCATGGGGGTGGTNAGCGCG 212 Query 6600 GAGGCGTACATGCCGC----AGATGTC-GTAGA-CGTAGAGGGGCTCCTCGAGGATGCCG 6653 |||||||||||| | | | ||||| ||| | ||| ||||||| ||| || || Sbjct 211 GAGGCGTACATGGCCCGACTAAATGTCCGTAAAACGTGAGGGGGCTCTCTGAGTATTCCA 152 Query 6654 ATGTAGGTGGGGTAGCAGCGCCCCCCGCGGATGCTGGCGCGCACGTAGTCATACAGCTCG 6713 | || ||||| ||||| | || ||||||||||||||||||||||| || || || ||| Sbjct 151 AGATATGTGGG-TAGCATCTTCCACCGCGGATGCTGGCGCGCACGTAATCGTATAGTTCG 93 Query 6714 TGCGAGGGGGCGAGGAGCCCCGGGCCCAGGTTGGTGCGACTGGGCTTTTCGGCGCGGTAG 6773 |||||||| |||||||| | || || |||||| | || ||||| || || ||| || Sbjct 92 TGCGAGGGAGCGAGGAGGTCGGGACCGAGGTTGCTACGGGCGGGCTGCTCTGCTCGGAAG 33 Query 6774 ACGATCTGGCGGAAAATGGCATGCGAGTTGGA 6805 | ||||| | ||| |||||||| |||||||| Sbjct 32 -CTATCTGCCTGAAGATGGCATGTGAGTTGGA 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 115856042488262