Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eucidaris_20tribuloides_20[genbank_20GCA_5F001188425.1_202015-04-14]
637,071 sequences; 2,187,261,492 total letters
Query= AC_000017.1
Length=36001
Score E
Sequences producing significant alignments: (Bits) Value
seq556156 385 1e-102
>seq556156
Length=560
Score = 385 bits (426), Expect = 1e-102
Identities = 259/283 (92%), Gaps = 9/283 (3%)
Strand=Plus/Minus
Query 6660 TGCGCGGGCGGCAAGCGCGCGCTCGTATGGGTTGAGTGGGGGACCCCATGGCATGGGGTG 6719
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 280 TGCGCGGGCG-CAAGCGCGCGCTCGTATGGGTTGAGTGGGGGACCCCATGGCATGGGGGT 222
Query 6720 GGTGAGCGCGGAGGCGTACATGCCGC----AGATGTC-GTAAA-CGTAGAGGGGCTCCCT 6773
||| |||||||||||||||||| | | | ||||| ||||| ||| ||||||| ||
Sbjct 221 GGTNAGCGCGGAGGCGTACATGGCCCGACTAAATGTCCGTAAAACGTGAGGGGGCTCTCT 162
Query 6774 GAGTATTCCAAGATATGTAGGGTAGCATCTTCCACCGCGGATGCTGGCGCGCACGTAATC 6833
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 161 GAGTATTCCAAGATATGT-GGGTAGCATCTTCCACCGCGGATGCTGGCGCGCACGTAATC 103
Query 6834 GTATAGTTCGTGCGAGGGGGCGAGGAGTTCGGGACCGAGGTTGCTACGGGCGGGCTGCTC 6893
|||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct 102 GTATAGTTCGTGCGAGGGAGCGAGGAGGTCGGGACCGAGGTTGCTACGGGCGGGCTGCTC 43
Query 6894 TGCTCGGAAGACGATCTGCCTGAAGATGGCATGCGAGTTCGAT 6936
|||||||||| | |||||||||||||||||||| ||||| |||
Sbjct 42 TGCTCGGAAG-CTATCTGCCTGAAGATGGCATGTGAGTTGGAT 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 114210982593826
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |