Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucidaris_20tribuloides_20[genbank_20GCA_5F001188425.1_202015-04-14] 637,071 sequences; 2,187,261,492 total letters Query= AC_000017.1 Length=36001 Score E Sequences producing significant alignments: (Bits) Value seq556156 385 1e-102 >seq556156 Length=560 Score = 385 bits (426), Expect = 1e-102 Identities = 259/283 (92%), Gaps = 9/283 (3%) Strand=Plus/Minus Query 6660 TGCGCGGGCGGCAAGCGCGCGCTCGTATGGGTTGAGTGGGGGACCCCATGGCATGGGGTG 6719 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 280 TGCGCGGGCG-CAAGCGCGCGCTCGTATGGGTTGAGTGGGGGACCCCATGGCATGGGGGT 222 Query 6720 GGTGAGCGCGGAGGCGTACATGCCGC----AGATGTC-GTAAA-CGTAGAGGGGCTCCCT 6773 ||| |||||||||||||||||| | | | ||||| ||||| ||| ||||||| || Sbjct 221 GGTNAGCGCGGAGGCGTACATGGCCCGACTAAATGTCCGTAAAACGTGAGGGGGCTCTCT 162 Query 6774 GAGTATTCCAAGATATGTAGGGTAGCATCTTCCACCGCGGATGCTGGCGCGCACGTAATC 6833 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 161 GAGTATTCCAAGATATGT-GGGTAGCATCTTCCACCGCGGATGCTGGCGCGCACGTAATC 103 Query 6834 GTATAGTTCGTGCGAGGGGGCGAGGAGTTCGGGACCGAGGTTGCTACGGGCGGGCTGCTC 6893 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct 102 GTATAGTTCGTGCGAGGGAGCGAGGAGGTCGGGACCGAGGTTGCTACGGGCGGGCTGCTC 43 Query 6894 TGCTCGGAAGACGATCTGCCTGAAGATGGCATGCGAGTTCGAT 6936 |||||||||| | |||||||||||||||||||| ||||| ||| Sbjct 42 TGCTCGGAAG-CTATCTGCCTGAAGATGGCATGTGAGTTGGAT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 114210982593826