Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucidaris_20tribuloides_20[genbank_20GCA_5F001188425.1_202015-04-14] 637,071 sequences; 2,187,261,492 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq250674 84.2 5e-11 >seq250674 Length=71378 Score = 84.2 bits (92), Expect = 5e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 230395 GAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC-CTTATTGG 230453 ||||| ||||| | |||||||| ||| | || || ||| ||| ||| || || || Sbjct 3449 GAAGCTGTTGAGATTGAAAAGGAATTCTTAACGGATGCCTTTCAATG-CGCTCTAATCGG 3507 Query 230454 CATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGC 230513 || ||||| || ||||||||||| || ||||| || ||||| | | | ||| Sbjct 3508 GATCAACGCAACTCTGATGGGACAGTATATAGAATTTGTTGCCGATAGACTACTACTTGA 3567 Query 230514 ACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTC 230573 || || ||||| || ||||| || | | || || |||| |||||||| |||||| Sbjct 3568 GCTCGGATACGATAAGGTGTATAATGTTGACAATCCATTTGACTTTATGGAAAACATTTC 3627 Query 230574 GCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCA 230621 | | |||| ||||| || || || |||| || || | || ||||| Sbjct 3628 GTTGGAAGGCAAGACTAATTTTTTTGAAAGACGAGTTGGGGAATATCA 3675 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1049189541020730