Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucidaris_20tribuloides_20[genbank_20GCA_5F001188425.1_202015-04-14] 637,071 sequences; 2,187,261,492 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq61311 82.4 6e-11 >seq61311 Length=60834 Score = 82.4 bits (90), Expect = 6e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 19061 GGGCCTTGGGGTACCGTTCAACATTGCTGGATATGCACTTCTTACCTACATAGTAGCGCA 19120 ||| || || || || ||||||||||| | ||| | || | || ||||| |||| || Sbjct 50539 GGGTCTGGGCGTGCCATTCAACATTGCCAGCTATTCTCTGTTGACATACATGATAGCCCA 50598 Query 19121 TGTTACAGGACTTAAAACCGGAGATTTAATTCATACAATGGGGGATGCACATATTTACTT 19180 ||| || ||| || | || || || ||||| || || || ||||||||| | ||||| Sbjct 50599 TGTAACTAACCTTCAACCAGGGGAGTTTATTCACACCATTGGAGATGCACATGTCTACTT 50658 Query 19181 GAATCATATAGATGC 19195 |||||| || ||||| Sbjct 50659 GAATCACATCGATGC 50673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396402129969195