Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucidaris_20tribuloides_20[genbank_20GCA_5F001188425.1_202015-04-14] 637,071 sequences; 2,187,261,492 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq61311 102 6e-17 seq447969 93.3 3e-14 >seq61311 Length=60834 Score = 102 bits (112), Expect = 6e-17 Identities = 101/131 (77%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 101681 AGAGCATCAATGTGATCTACATAGATGTGAGCATCTCCTATAGTATGGATAAACTCTCCA 101740 || ||||| ||||||| | |||| || |||||||| || || || |||||||| || Sbjct 50676 AGTGCATCGATGTGATTCAAGTAGACATGTGCATCTCCAATGGTGTGAATAAACTCCCCT 50617 Query 101741 GGCACTAGATTAGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTA 101800 || || ||||| ||||| || |||||| | || || ||||||||||| |||||||| Sbjct 50616 GGTTGAAGGTTAGTTACATGGGCTATCATGTATGTCAACAGAGAATAGCTGGCAATGTTG 50557 Query 101801 AATGGCACTCC 101811 |||||||| || Sbjct 50556 AATGGCACGCC 50546 >seq447969 Length=52233 Score = 93.3 bits (102), Expect = 3e-14 Identities = 99/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 101681 AGAGCATCAATGTGATCTACATAGATGTGAGCATCTCCTATAGTATGGATAAACTCTCCA 101740 |||||||| || |||| | |||| || |||||||||||||| || || || || || Sbjct 18388 AGAGCATCGATATGATTCAAGTAGACATGGGCATCTCCTATAGTGTGAATGAATTCGCCT 18447 Query 101741 GGCACTAGATTAGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTA 101800 || || | ||| ||||| || ||||| | || || ||||||||||| |||||||| Sbjct 18448 GGTTGGAGGTCAGTTACATGGGCTATCATATATGTCAACAGAGAATAGCTGGCAATGTTG 18507 Query 101801 AATGGCACTCC 101811 |||||||| || Sbjct 18508 AATGGCACGCC 18518 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358446336291821