Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucidaris_20tribuloides_20[genbank_20GCA_5F001188425.1_202015-04-14] 637,071 sequences; 2,187,261,492 total letters Query= NC_001454.1 Length=34214 Score E Sequences producing significant alignments: (Bits) Value seq556156 89.7 1e-13 >seq556156 Length=560 Score = 89.7 bits (98), Expect = 1e-13 Identities = 138/195 (71%), Gaps = 7/195 (4%) Strand=Plus/Minus Query 6208 CGCTAGGGCGCGCTCGTAGGGATTGAGTGGGAAGCCCCACGGCATGGGATGGGTAAGTGC 6267 ||| || ||||||||||| || ||||||||| ||||| |||||||| ||| || || Sbjct 272 CGCAAGCGCGCGCTCGTATGGGTTGAGTGGGGGACCCCATGGCATGGGGGTGGTNAGCGC 213 Query 6268 AGAGGCGTACATGCCAC----AGATGTC--ATAAACGTAAAGTGGTTCGCGTAGCACCCC 6321 |||||||||||| | | | ||||| |||||| | | || || | || | || Sbjct 212 GGAGGCGTACATGGCCCGACTAAATGTCCGTAAAACGTGAGGGGGCTCTCTGAGTATTCC 153 Query 6322 AATGTAAGTTGGATAACAGCGTCCTCCGCGAATGCTAGCCCGAACATAGTCATACATTTC 6381 || || | ||| || || | ||| ||||| ||||| || || || || || || | ||| Sbjct 152 AAGATATG-TGGGTAGCATCTTCCACCGCGGATGCTGGCGCGCACGTAATCGTATAGTTC 94 Query 6382 GTGGGAAGGGGCCAG 6396 ||| || || || || Sbjct 93 GTGCGAGGGAGCGAG 79 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 108535843537152