Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucidaris_20tribuloides_20[genbank_20GCA_5F001188425.1_202015-04-14] 637,071 sequences; 2,187,261,492 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq34585 95.1 2e-14 >seq34585 Length=75490 Score = 95.1 bits (104), Expect = 2e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| | ||||| || || ||||| || || || ||||| | || | | | Sbjct 7496 ATGCAGATCTTTGTGAAGACCCTCACTGGCAAGACCATCACATTAGAGGTAGAGCCCAGT 7555 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| || ||| | ||| || || || || || |||||||| || || ||||| Sbjct 7556 GATACCATCGAAAATGTGAAAGCAAAGATCCAGGACAAGGAAGGTATCCCGCCAGATCAG 7615 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | || || ||||||||||| || | ||||| | || || | ||| || ||| Sbjct 7616 CAGCGTCTCATCTTTGCAGGAAAGCAGCTCGAGGACGGCCGTACCCTGTCAGACTACAAT 7675 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || || || || || ||| | ||| | || || ||| | || |||||||| Sbjct 7676 ATCCAGAAGGAGTCGACTCTTCATCTCGTGTTGCGTCTCCGTGGTGGTAT 7725 Score = 86.0 bits (94), Expect = 9e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| | || || || || ||||| || || || | ||| | ||| | | | Sbjct 6584 ATGCAGATCTTTGTGAAAACTCTCACTGGCAAGACCATCACACTTGAGGTCGAACCTAGT 6643 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| ||| | || || || || || || |||||||| ||||||||||| Sbjct 6644 GATACCATTGAAAATGTGAAGGCCAAGATCCAGGACAAGGAAGGTATCCCACCTGATCAG 6703 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | || || || || || || || | |||||| | || || | || || ||| Sbjct 6704 CAGCGACTCATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACTCTGTCTGACTACAAT 6763 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || || || || ||||| | ||| | || || ||| | || |||||||| Sbjct 6764 ATCCAGAAGGAGTCAACACTTCATCTTGTGTTGCGTCTCCGTGGTGGTAT 6813 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 749440011132800