Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucidaris_20tribuloides_20[genbank_20GCA_5F001188425.1_202015-04-14] 637,071 sequences; 2,187,261,492 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq251981 93.3 9e-14 seq286747 86.0 1e-11 >seq251981 Length=36728 Score = 93.3 bits (102), Expect = 9e-14 Identities = 105/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 249297 GTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACGAGCTCAT 249356 |||||| || || || || || ||||| |||| || |||||| |||| || ||| Sbjct 21538 GTGGCATGCGGACATCTTCGACTTCCTAGACTGCAAGAAGAACCACGGGAAAGAGGAGCA 21479 Query 249357 GAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATGCGCCGCGTCAA 249416 | | || |||||||| ||||||| ||||||||| ||||| |||||||| | ||| | Sbjct 21478 GCGTGCCCGTGACCTTTTCTACGCCCTGTGGGTGCCCGACCTGTTCATGAAGAGGGTCGA 21419 Query 249417 GGCCGACGGCGATTGGACGCT 249437 | || |||||||||||||| Sbjct 21418 GCAAGATGGCGATTGGACGCT 21398 >seq286747 Length=126893 Score = 86.0 bits (94), Expect = 1e-11 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 249298 TGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACGAGCTCATG 249357 ||||| || || || || || ||||| |||| || |||||| |||| || ||| | Sbjct 122525 TGGCATGCGGACATCTTCGACTTCCTAGACTGCAAGAAGAACCACGGGAAAGAGGAGCAG 122584 Query 249358 AGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATGCGCCGCGTCAAG 249417 | || |||||||| ||||||| ||||||||| ||||| |||||||| | || || Sbjct 122585 CGTGCCCGTGACCTTTTCTACGCCCTGTGGGTGCCCGACCTGTTCATGAAGAGGGTTGAG 122644 Query 249418 GCCGACGGCGATTGGACGCT 249437 || |||||||||||||| Sbjct 122645 CAAGATGGCGATTGGACGCT 122664 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1065001811624128