Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucidaris_20tribuloides_20[genbank_20GCA_5F001188425.1_202015-04-14] 637,071 sequences; 2,187,261,492 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq34585 89.7 4e-13 >seq34585 Length=75490 Score = 89.7 bits (98), Expect = 4e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 ||| ||||| ||||||||||| ||| || |||| || || || ||||| ||||| Sbjct 7459 CTCTTTCTGGATGTTGTAGTCTGACAGGGTACGGCCGTCCTCGAGCTGCTTTCCAGCGAA 7400 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264 || | ||||| || || || || | ||||||||||||| || ||| ||| || Sbjct 7399 GATGAGACGCTGCTGATCTGGTGGGATACCCTCCTTGTCCTGGATCTTTGCCTTTACATT 7340 Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324 | | |||| | ||||||||||| || || || ||||| || || |||||||| Sbjct 7339 TTCAATAGTGTCACTTGGCTCCACCTCCAGAGTGATGGTTTTGCCAGTTAGCGTCTTCAC 7280 Query 45325 AAAGATTTGCAT 45336 ||||| ||||| Sbjct 7279 GAAGATCTGCAT 7268 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 392007716513491