Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucidaris_20tribuloides_20[genbank_20GCA_5F001188425.1_202015-04-14] 637,071 sequences; 2,187,261,492 total letters Query= NC_003266.2 Length=35994 Score E Sequences producing significant alignments: (Bits) Value seq556156 170 4e-38 >seq556156 Length=560 Score = 170 bits (188), Expect = 4e-38 Identities = 204/272 (75%), Gaps = 8/272 (3%) Strand=Plus/Minus Query 6495 GCCAGCGCGCGCTCGTAGGGACTAAGGGGCGTGCCCCAGGGCATGGGGTGGGTGAGCGCG 6554 || |||||||||||||| || | || || | ||||| ||||||||| ||| |||||| Sbjct 271 GCAAGCGCGCGCTCGTATGGGTTGAGTGGGGGACCCCATGGCATGGGGGTGGTNAGCGCG 212 Query 6555 GAGGCGTACATGCCGC----AGATGTC-GTAGA-CGTAGAGGGGCTCATCAAGGATGCCA 6608 |||||||||||| | | | ||||| ||| | ||| ||||||| || || ||| Sbjct 211 GAGGCGTACATGGCCCGACTAAATGTCCGTAAAACGTGAGGGGGCTCTCTGAGTATTCCA 152 Query 6609 ATGTAGGTGGGGTAGCAGCGGCCCCCGCGGATGCTGGCGCGCACGTAGTCATACAACTCG 6668 | || ||||| ||||| | || ||||||||||||||||||||||| || || | ||| Sbjct 151 AGATATGTGGG-TAGCATCTTCCACCGCGGATGCTGGCGCGCACGTAATCGTATAGTTCG 93 Query 6669 TGCGAGGGGGCGAGGAGCCCGGCTCCGAGATTGGCGCGGCTGGGTTTTTCGGCGCGGTAG 6728 |||||||| |||||||| ||| ||||| ||| ||| ||| | || || ||| || Sbjct 92 TGCGAGGGAGCGAGGAGGTCGGGACCGAGGTTGCTACGGGCGGGCTGCTCTGCTCGGAAG 33 Query 6729 ACGATCTGACGGAAGATGGCGTGGGAGTTGGA 6760 | ||||| | ||||||||| || |||||||| Sbjct 32 -CTATCTGCCTGAAGATGGCATGTGAGTTGGA 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 114188752054712