Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucidaris_20tribuloides_20[genbank_20GCA_5F001188425.1_202015-04-14] 637,071 sequences; 2,187,261,492 total letters Query= NC_006144.1 Length=34246 Score E Sequences producing significant alignments: (Bits) Value seq556156 150 4e-32 >seq556156 Length=560 Score = 150 bits (166), Expect = 4e-32 Identities = 200/271 (74%), Gaps = 9/271 (3%) Strand=Plus/Minus Query 6494 CAAG-GCGCGCTCGTAGGGACTGAGGGGGGCGCCCCAGGGCATGGGATGCGTCAGGGCCG 6552 |||| ||||||||||| || |||| |||| ||||| |||||||| || || || | Sbjct 270 CAAGCGCGCGCTCGTATGGGTTGAGTGGGGGACCCCATGGCATGGGGGTGGTNAGCGCGG 211 Query 6553 AGGCGTACATGCCGC----AGATGTC-GTAGA-CGTAAAGGGGCTCCTCCAGGACGCCGA 6606 ||||||||||| | | | ||||| ||| | ||| | ||||||| || | || | Sbjct 210 AGGCGTACATGGCCCGACTAAATGTCCGTAAAACGTGAGGGGGCTCTCTGAGTATTCCAA 151 Query 6607 GGTAGGTTGGGTAGCAGCGCCCCCCGCGGATGCTGGCCCGTACGTAGTCGTAGAGCTCGT 6666 | || || |||||||| | || |||||||||||||| || ||||| ||||| || |||| Sbjct 150 GATATGT-GGGTAGCATCTTCCACCGCGGATGCTGGCGCGCACGTAATCGTATAGTTCGT 92 Query 6667 GCGAGGGGGCCAGAAGGTGGCGGCTGAGGTGAGCGCGCTGGGGCTTTTCATCTCGGAAGA 6726 ||||||| || || |||| | | | ||||| || ||||| || |||||||| Sbjct 91 GCGAGGGAGCGAGGAGGTCGGGACCGAGGTTGCTACGGGCGGGCTGCTCTGCTCGGAAG- 33 Query 6727 GGATCTGCCTGAAGATGGCGTGGGAGTTGGA 6757 ||||||||||||||||| || |||||||| Sbjct 32 CTATCTGCCTGAAGATGGCATGTGAGTTGGA 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 108637468858816