Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucidaris_20tribuloides_20[genbank_20GCA_5F001188425.1_202015-04-14] 637,071 sequences; 2,187,261,492 total letters Query= NC_006879.1 Length=34450 Score E Sequences producing significant alignments: (Bits) Value seq556156 122 2e-23 >seq556156 Length=560 Score = 122 bits (134), Expect = 2e-23 Identities = 194/273 (71%), Gaps = 8/273 (3%) Strand=Plus/Minus Query 6157 CGCCAGGGCCCTTTCGTAGGGATTCAGGGGCGGTCCCCAGGGCATGGGGTGGGTCAGGGC 6216 ||| || || | ||||| || || || || || ||||| ||||||||| ||| || || Sbjct 272 CGCAAGCGCGCGCTCGTATGGGTTGAGTGGGGGACCCCATGGCATGGGGGTGGTNAGCGC 213 Query 6217 CGAGGCGTACATGCCGC----AGATGTC-GTACA-CGTACAGGGGCTCCCTCAACACCCC 6270 |||||||||||| | | | ||||| ||| | ||| ||||||| || | | || Sbjct 212 GGAGGCGTACATGGCCCGACTAAATGTCCGTAAAACGTGAGGGGGCTCTCTGAGTATTCC 153 Query 6271 GATGTAAGTGGGGTAACAGCGCCCCCCGCGGATGCTGGCTCGCACGTAGTCGTACATCTC 6330 | || ||||| || || | || |||||||||||||| |||||||| ||||| | || Sbjct 152 AAGATATGTGGG-TAGCATCTTCCACCGCGGATGCTGGCGCGCACGTAATCGTATAGTTC 94 Query 6331 GTGAGAGGGAGCCATGAGCCCGTCTCCCAAGTGGGTCTTGTGGGGTTTTTCGGCCCGGTA 6390 ||| |||||||| | ||| || || | || | | | ||| | || || ||| | Sbjct 93 GTGCGAGGGAGCGAGGAGGTCGGGACCGAGGTTGCTACGGGCGGGCTGCTCTGCTCGGAA 34 Query 6391 GAGGATCTGCCTGAAGATGGCGTGGGAGTTGGA 6423 | ||||||||||||||||| || |||||||| Sbjct 33 G-CTATCTGCCTGAAGATGGCATGTGAGTTGGA 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 109285330284424