Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucidaris_20tribuloides_20[genbank_20GCA_5F001188425.1_202015-04-14] 637,071 sequences; 2,187,261,492 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq250674 104 2e-17 >seq250674 Length=71378 Score = 104 bits (114), Expect = 2e-17 Identities = 170/241 (71%), Gaps = 3/241 (1%) Strand=Plus/Minus Query 104589 TTTG-TATTCGCCTACTCGTTTTTCaaaaaaaTTAGTCTTGCCCTCCAGAGAAATATTAT 104647 |||| ||||| || |||||| |||||||||||||||||||||| |||| ||||| || | Sbjct 3677 TTTGATATTCCCCAACTCGTCTTTCAAAAAAATTAGTCTTGCCTTCCAACGAAATGTTTT 3618 Query 104648 TCATAAATTCGAAAGGATTCAAAGTCTTAAAATATTTTTCGTAGCCAAGCTCGATCAACA 104707 |||||| || || ||||| | ||| | || ||||| || ||||| | | | Sbjct 3617 CCATAAAGTCAAATGGATTGTCAACATTATACACCTTATCGTATCCGAGCTCAAGTAGTA 3558 Query 104708 GTCGATCCGCCACAAATTCGATGTACTCGCACAT-AGAATGTGCATTCATGCCCAGCATT 104766 ||| ||| || |||||||| || |||| | ||| ||| | ||| || || || | | Sbjct 3557 GTCTATCGGCAACAAATTCTATATACTGTCCCATCAGAGT-TGCGTTGATCCCGATTAGA 3499 Query 104767 GCGACGGGTAAAGCGTTAGTaaaaaaaTCTTTCTCGATGTCCACGGCTTCCTTAAACATG 104826 ||| | || || | || || || || || || || || || ||||| |||| |||| Sbjct 3498 GCGCATTGAAAGGCATCCGTTAAGAATTCCTTTTCAATCTCAACAGCTTCATTAACCATG 3439 Query 104827 T 104827 | Sbjct 3438 T 3438 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426597846706005