Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucidaris_20tribuloides_20[genbank_20GCA_5F001188425.1_202015-04-14] 637,071 sequences; 2,187,261,492 total letters Query= NC_010956.1 Length=35083 Score E Sequences producing significant alignments: (Bits) Value seq556156 176 1e-39 >seq556156 Length=560 Score = 176 bits (194), Expect = 1e-39 Identities = 211/280 (75%), Gaps = 9/280 (3%) Strand=Plus/Minus Query 6456 CGCGGGCGGCCAGCGCTCGCTCGTAGGGGTTGAGGGGCGGACCCCAGGGCATGGGATGAG 6515 |||||||| | ||||| |||||||| |||||||| || |||||||| |||||||| | Sbjct 278 CGCGGGCG-CAAGCGCGCGCTCGTATGGGTTGAGTGGGGGACCCCATGGCATGGGGGTGG 220 Query 6516 TGAGGGCGGAGGCGTACATGCCGC----AGATGTC-GTAGACATAGATGGG-CTCCGAGA 6569 | || ||||||||||||||| | | | ||||| ||| | || ||| ||| || Sbjct 219 TNAGCGCGGAGGCGTACATGGCCCGACTAAATGTCCGTAAAACGTGAGGGGGCTCTCTGA 160 Query 6570 GGATGCCGATGTAGGTGGGATAACAGCGCCCCCCGCGGATGCTGGCGCGCACGTAGTCAT 6629 | || || | || ||||| || || | || ||||||||||||||||||||||| || | Sbjct 159 GTATTCCAAGATATGTGGG-TAGCATCTTCCACCGCGGATGCTGGCGCGCACGTAATCGT 101 Query 6630 ACAACTCGTGCGAGGGGGCCAAGAAGGCGGGGCCGAGATTGGTGCGCTGGGGCTGCTCGG 6689 | | ||||||||||| || | || | |||| ||||| ||| | || ||||||||| | Sbjct 100 ATAGTTCGTGCGAGGGAGCGAGGAGGTCGGGACCGAGGTTGCTACGGGCGGGCTGCTCTG 41 Query 6690 CGCGGAAGACGATCTGGCGAAAGATGGCGTGCGAGTTGGA 6729 | |||||| | ||||| | |||||||| || |||||||| Sbjct 40 CTCGGAAG-CTATCTGCCTGAAGATGGCATGTGAGTTGGA 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 111295606178590