Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucidaris_20tribuloides_20[genbank_20GCA_5F001188425.1_202015-04-14] 637,071 sequences; 2,187,261,492 total letters Query= NC_011202.1 Length=34794 Score E Sequences producing significant alignments: (Bits) Value seq556156 96.9 8e-16 >seq556156 Length=560 Score = 96.9 bits (106), Expect = 8e-16 Identities = 189/273 (69%), Gaps = 10/273 (4%) Strand=Plus/Minus Query 6526 GCCAGTGCGCGCTCATATGGGTTAAGGGGACTGCCCCATGGCATGGGATGGGTGAGTGCA 6585 || || |||||||| |||||||| || || |||||||||||||| ||| || || Sbjct 271 GCAAGCGCGCGCTCGTATGGGTTGAGTGGGGGACCCCATGGCATGGGGGTGGTNAGCGCG 212 Query 6586 GAGGCATACATGCCAC----AGATGTC--ATAGACGTAGATGGGATCCTCAAAG-ATGCC 6638 ||||| |||||| | | | ||||| | |||| || ||| ||| || || || Sbjct 211 GAGGCGTACATGGCCCGACTAAATGTCCGTAAAACGT-GAGGGGGCTCTCTGAGTATTCC 153 Query 6639 TATGTAGGTTGGATAGCATCGCCCCCCTCTGATACTTGCTCGCACATAGTCATATAGTTC 6698 | || | ||| ||||||| || || | ||| || || ||||| || || |||||||| Sbjct 152 AAGATATG-TGGGTAGCATCTTCCACCGCGGATGCTGGCGCGCACGTAATCGTATAGTTC 94 Query 6699 ATGTGATGGCGCTAGCAGCCCCGGACCCAAGTTGGTGCGATTGGGTTTTTCTGTTCTGTA 6758 || || || || || || | ||||| | |||| | || ||| | |||| || | | Sbjct 93 GTGCGAGGGAGCGAGGAGGTCGGGACCGAGGTTGCTACGGGCGGGCTGCTCTGCTCGGAA 34 Query 6759 GACGATCTGGCGAAAGATGGCGTGAGAATTGGA 6791 | | ||||| | |||||||| || || ||||| Sbjct 33 G-CTATCTGCCTGAAGATGGCATGTGAGTTGGA 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 110377802492312