Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucidaris_20tribuloides_20[genbank_20GCA_5F001188425.1_202015-04-14] 637,071 sequences; 2,187,261,492 total letters Query= NC_011203.1 Length=35343 Score E Sequences producing significant alignments: (Bits) Value seq556156 129 1e-25 >seq556156 Length=560 Score = 129 bits (142), Expect = 1e-25 Identities = 195/272 (72%), Gaps = 8/272 (3%) Strand=Plus/Minus Query 6510 GCCAGCGCGCGCTCATAGGGGTTAAGAGGGGTGCCCCAGGGCATGGGGTGGGTGAGCGCG 6569 || ||||||||||| || ||||| || |||| ||||| ||||||||| ||| |||||| Sbjct 271 GCAAGCGCGCGCTCGTATGGGTTGAGTGGGGGACCCCATGGCATGGGGGTGGTNAGCGCG 212 Query 6570 GAGGCATACATGCCAC----AGATAT-CGT-AGACATAGAGGGGCTCTTCGAGGATGCCG 6623 ||||| |||||| | | | || | ||| | || | |||||||| ||| || || Sbjct 211 GAGGCGTACATGGCCCGACTAAATGTCCGTAAAACGTGAGGGGGCTCTCTGAGTATTCCA 152 Query 6624 ATGTAAGTGGGATAACATCGCCCCCCTCTGATGCTTGCTCGCACATAGTCATAGAGTTCA 6683 | || ||||| || |||| || || | |||||| || ||||| || || || ||||| Sbjct 151 AGATATGTGGG-TAGCATCTTCCACCGCGGATGCTGGCGCGCACGTAATCGTATAGTTCG 93 Query 6684 TGTGAGGGGGCAAGAAGACCCGGGCCCAGATTGGTGCGGTTGGGTTTTTCCGCCCTGTAA 6743 || ||||| || || || | || || || ||| | ||| ||| | || || | | || Sbjct 92 TGCGAGGGAGCGAGGAGGTCGGGACCGAGGTTGCTACGGGCGGGCTGCTCTGCTC-GGAA 34 Query 6744 ACGATCTGGCGAAAGATGGCATGGGAATTGGA 6775 | ||||| | ||||||||||| || ||||| Sbjct 33 GCTATCTGCCTGAAGATGGCATGTGAGTTGGA 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 112121311917110