Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucidaris_20tribuloides_20[genbank_20GCA_5F001188425.1_202015-04-14] 637,071 sequences; 2,187,261,492 total letters Query= NC_012959.1 Length=34920 Score E Sequences producing significant alignments: (Bits) Value seq556156 152 1e-32 >seq556156 Length=560 Score = 152 bits (168), Expect = 1e-32 Identities = 204/279 (73%), Gaps = 9/279 (3%) Strand=Plus/Minus Query 6463 GCGGGCGGCCAGGGCTCGCTCGCAGGGGTTCAGGGGCGGACCCCAGGGCATGGGATGCGT 6522 ||||||| | || || |||||| | ||||| || || |||||||| |||||||| || Sbjct 277 GCGGGCG-CAAGCGCGCGCTCGTATGGGTTGAGTGGGGGACCCCATGGCATGGGGGTGGT 219 Query 6523 AAGCGCGGAGGCGTACATGCCGC----AGATGTCAT--ACACATAGATGGGCTCCGAGAG 6576 |||||||||||||||||| | | | ||||| | || | |||||| ||| Sbjct 218 NAGCGCGGAGGCGTACATGGCCCGACTAAATGTCCGTAAAACGTGAGGGGGCTCTCTGAG 159 Query 6577 GATGCCGATGTAGGTGGGATAACAGCGCCCCCCGCGGATGCTGGCGCGCACGTAGTCATA 6636 || || | || ||||| || || | || ||||||||||||||||||||||| || || Sbjct 158 TATTCCAAGATATGTGGG-TAGCATCTTCCACCGCGGATGCTGGCGCGCACGTAATCGTA 100 Query 6637 CAACTCATGCGAGGGTGCCAAGAAGGCGGGGCCAAGATTGGTGCGCTGGGGCTGCTCGGC 6696 | || |||||||| || | || | |||| || || ||| | || ||||||||| || Sbjct 99 TAGTTCGTGCGAGGGAGCGAGGAGGTCGGGACCGAGGTTGCTACGGGCGGGCTGCTCTGC 40 Query 6697 GCGAAAGACGATCTGGCGAAAGATGGCATGCGAGTTGGA 6735 || ||| | ||||| | ||||||||||| |||||||| Sbjct 39 TCGGAAG-CTATCTGCCTGAAGATGGCATGTGAGTTGGA 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 110777952196364